Top 10 genes with highest correlation to Rv0530/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1057/- | (cc=0.5674) | info on Rv1057/- |
| Rv0536/galE3 | (cc=0.5137) | info on Rv0536/galE3 |
| Rv2402/- | (cc=0.5029) | info on Rv2402/- |
| Rv0493c/- | (cc=0.496) | info on Rv0493c/- |
| Rv0113/gmhA | (cc=0.4933) | info on Rv0113/gmhA |
| Rv2748c/ftsK | (cc=0.4922) | info on Rv2748c/ftsK |
| Rv3294c/- | (cc=0.4876) | info on Rv3294c/- |
| Rv3786c/- | (cc=0.4871) | info on Rv3786c/- |
| Rv0134/ephF | (cc=0.4818) | info on Rv0134/ephF |
| Rv0442c/PPE10 | (cc=0.4707) | info on Rv0442c/PPE10 |
Correlation of Rv0530/- with Rv0113/gmhA
Normalized LFCs for Rv0530/-:
(description and provenance of datasets)
| Rv0530/- | Rv0113/gmhA | |
| Fe_supp_jason_reseq | -0.276 | 2.595 |
| low_pH_jason_reseq | -0.321 | -0.831 |
| NO_jason_reseq | 0.236 | -1.536 |
| B6_jason_reseq | 0.625 | 3.067 |
| MHCII_jason_reseq | 0.96 | 2.446 |
| Isoniazid02 | 0.292 | 1.801 |
| Rifampicin4 | -0.222 | 0.1 |
| Ethambutol3 | 0.582 | 0.327 |
| Meropenem3 | 0.265 | -0.341 |
| Vancomycin16 | -0.838 | -0.098 |
| Rv2680_day32 | -0.954 | 0.0 |
| H37Rv_KO_MarP | 0.12 | 0.754 |
| hypoxia_3wks | -0.57 | -0.415 |
| hypoxia_6wks | -0.23 | -0.708 |
| glycerol | -0.044 | 0.398 |
| cholesterol | -0.614 | -0.353 |
| AJ | 0.309 | 0.874 |
| Bibs02 | 0.351 | 2.099 |
| Bibs02c | 0.333 | 2.536 |
| BL6 | -0.4 | -0.982 |
| BL6a | 0.042 | 1.936 |
| BXD01 | -0.154 | -0.079 |
| BXD010 | -0.646 | 0.273 |
| BXD011 | -0.259 | 0.097 |
| BXD03 | -0.672 | -1.526 |
| BXD04 | 0.031 | -0.5 |
| BXD05 | -0.544 | -2.089 |
| BXD06 | -0.618 | 0.051 |
| BXD07 | -0.137 | 0.227 |
| BXD08 | -0.277 | -0.053 |
| BXD09 | -0.568 | -0.886 |
| CAST | 0.864 | 1.552 |
| CCcont | -0.12 | -0.255 |
| DS01 | 1.025 | 2.712 |
| DS02 | -0.154 | 2.039 |
| DS04 | 0.309 | 2.791 |
| DS0c | 0.787 | 2.918 |
| GP01 | 0.37 | -1.236 |
| GP02 | 1.026 | 0.899 |
| GP0c | 0.212 | 0.416 |
| NOD | 0.029 | 1.671 |
| NZO | 0.026 | -0.207 |
| PWK | 0.742 | 0.6 |
| H37Rv_KO_CtpC | -0.435 | -0.065 |
| H37Rv_KO_CtpD | 0.327 | 1.187 |
| H37Rv_KO_Rv1272 | -1.102 | -0.415 |
| H37Rv_KO_SugABC | 0.252 | 1.38 |
| H37Rv_KO_MbtN | 0.125 | 1.197 |
| Trans05 | -0.813 | -0.689 |
| macrophage_unactivated | -0.331 | 0.12 |
| IL1 | 0.208 | -0.489 |
| Rapamycin | 0.675 | -1.396 |
| Tcell | -0.469 | -0.261 |
| GMCSF | 0.364 | 0.573 |
| IFNab | -0.46 | -0.916 |
| IFNg | -0.059 | -0.559 |
| IFNg_GMCSF1 | 1.345 | 0.682 |
| Rv1432_day32 | 0.849 | 2.356 |
| Rv1565c_day32 | -0.518 | -0.415 |
| secA2_input | 0.333 | -0.188 |
| delta_Rv3594 | -0.393 | 3.223 |
| delta_Rv3717 | 0.345 | 1.258 |
| delta_Rv3811 | -0.256 | 0.813 |
| delta_Rv0954 | 0.224 | 1.95 |
| PonA1 | 0.391 | 2.546 |
| EccD1_KO | -0.444 | -1.5 |
| EspI_KO | -0.536 | -2.524 |
| PE35_KO | -0.099 | -1.097 |
| PPE68_KO | -0.55 | -1.328 |
| glycerol2 | 0.015 | 0.311 |
| lignocerate | 0.961 | 0.868 |
| oleate | -0.472 | 0.588 |
| phosphatidylcholine | 0.353 | 0.496 |
| acetate | 0.251 | 0.836 |
| glucAc | 0.367 | 0.971 |
| Rv0950ko | 0.244 | 1.423 |
| Rv1096ko | 0.29 | -0.142 |
| Rv3684ko | 0.39 | 0.151 |
| delta_otsA_trehalose | 0.888 | 0.305 |