Top 10 genes with highest correlation to Rv0432/sodC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3535c/hsaG | (cc=0.6046) | info on Rv3535c/hsaG |
| Rv0312/- | (cc=0.5804) | info on Rv0312/- |
| Rv1405c/- | (cc=0.556) | info on Rv1405c/- |
| Rv3550/echA20 | (cc=0.5549) | info on Rv3550/echA20 |
| Rv1590/- | (cc=0.5308) | info on Rv1590/- |
| Rv3873/PPE68 | (cc=0.527) | info on Rv3873/PPE68 |
| Rv3534c/hsaF | (cc=0.5262) | info on Rv3534c/hsaF |
| Rv3502c/- | (cc=0.5135) | info on Rv3502c/- |
| Rv1237/sugB | (cc=0.5105) | info on Rv1237/sugB |
| Rv1109c/- | (cc=0.5085) | info on Rv1109c/- |
Correlation of Rv0432/sodC with Rv1590/-
Normalized LFCs for Rv0432/sodC:
(description and provenance of datasets)
| Rv0432/sodC | Rv1590/- | |
| Fe_supp_jason_reseq | 0.606 | 1.809 |
| low_pH_jason_reseq | 0.609 | -2.058 |
| NO_jason_reseq | 0.289 | -0.391 |
| B6_jason_reseq | -1.779 | -5.114 |
| MHCII_jason_reseq | -1.466 | -4.029 |
| Isoniazid02 | -0.554 | -0.288 |
| Rifampicin4 | -1.752 | -0.273 |
| Ethambutol3 | -0.255 | 0.114 |
| Meropenem3 | -0.546 | 0.156 |
| Vancomycin16 | -1.21 | 0.462 |
| Rv2680_day32 | 0.147 | -4.076 |
| H37Rv_KO_MarP | 0.262 | -0.391 |
| hypoxia_3wks | -1.332 | 0.598 |
| hypoxia_6wks | -1.234 | -0.18 |
| glycerol | -0.696 | -6.0 |
| cholesterol | -0.31 | -4.706 |
| AJ | -1.519 | -6.0 |
| Bibs02 | -0.705 | -5.941 |
| Bibs02c | -0.762 | -6.0 |
| BL6 | 0.12 | -3.094 |
| BL6a | -0.257 | -5.463 |
| BXD01 | -0.753 | -3.774 |
| BXD010 | 0.518 | -4.161 |
| BXD011 | -0.25 | -3.691 |
| BXD03 | -0.886 | -4.393 |
| BXD04 | -1.171 | -4.018 |
| BXD05 | -1.014 | -3.329 |
| BXD06 | -0.382 | -4.337 |
| BXD07 | -0.061 | -4.499 |
| BXD08 | -0.54 | -4.321 |
| BXD09 | -0.062 | -4.566 |
| CAST | -1.91 | -5.586 |
| CCcont | 0.402 | 0.202 |
| DS01 | -1.745 | -6.0 |
| DS02 | -0.602 | -6.0 |
| DS04 | -1.872 | -3.596 |
| DS0c | -1.226 | -6.0 |
| GP01 | -0.292 | -2.937 |
| GP02 | -0.491 | -2.475 |
| GP0c | 0.254 | -1.317 |
| NOD | -1.298 | -4.357 |
| NZO | -0.21 | -6.0 |
| PWK | -1.823 | -5.836 |
| H37Rv_KO_CtpC | -0.42 | -4.101 |
| H37Rv_KO_CtpD | 0.185 | -1.658 |
| H37Rv_KO_Rv1272 | -0.697 | -4.196 |
| H37Rv_KO_SugABC | 0.609 | -1.708 |
| H37Rv_KO_MbtN | -0.345 | 0.152 |
| Trans05 | -1.436 | -3.603 |
| macrophage_unactivated | -0.833 | 0.145 |
| IL1 | 0.587 | -0.442 |
| Rapamycin | 0.11 | 2.243 |
| Tcell | 0.117 | 0.241 |
| GMCSF | -0.177 | 0.723 |
| IFNab | 0.193 | 1.36 |
| IFNg | 0.826 | -0.657 |
| IFNg_GMCSF1 | 0.113 | -2.209 |
| Rv1432_day32 | -1.246 | -6.0 |
| Rv1565c_day32 | -2.504 | -6.0 |
| secA2_input | -0.985 | -0.088 |
| delta_Rv3594 | 0.333 | 1.781 |
| delta_Rv3717 | -0.092 | 1.747 |
| delta_Rv3811 | 0.739 | 0.921 |
| delta_Rv0954 | 0.078 | 0.376 |
| PonA1 | 0.615 | 1.032 |
| EccD1_KO | -0.829 | -1.312 |
| EspI_KO | -0.95 | -0.556 |
| PE35_KO | -1.604 | -0.621 |
| PPE68_KO | -1.315 | -1.145 |
| glycerol2 | 0.464 | 0.0 |
| lignocerate | 0.991 | 0.168 |
| oleate | -0.44 | 0.0 |
| phosphatidylcholine | 1.158 | 0.0 |
| acetate | 1.049 | 0.0 |
| glucAc | 0.668 | 1.034 |
| Rv0950ko | 0.479 | -0.651 |
| Rv1096ko | 0.721 | 1.113 |
| Rv3684ko | 0.37 | -0.17 |
| delta_otsA_trehalose | 0.849 | 1.762 |