Top 10 genes with highest correlation to Rv0432/sodC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3535c/hsaG | (cc=0.6046) | info on Rv3535c/hsaG |
| Rv0312/- | (cc=0.5804) | info on Rv0312/- |
| Rv1405c/- | (cc=0.556) | info on Rv1405c/- |
| Rv3550/echA20 | (cc=0.5549) | info on Rv3550/echA20 |
| Rv1590/- | (cc=0.5308) | info on Rv1590/- |
| Rv3873/PPE68 | (cc=0.527) | info on Rv3873/PPE68 |
| Rv3534c/hsaF | (cc=0.5262) | info on Rv3534c/hsaF |
| Rv3502c/- | (cc=0.5135) | info on Rv3502c/- |
| Rv1237/sugB | (cc=0.5105) | info on Rv1237/sugB |
| Rv1109c/- | (cc=0.5085) | info on Rv1109c/- |
Correlation of Rv0432/sodC with Rv0312/-
Normalized LFCs for Rv0432/sodC:
(description and provenance of datasets)
| Rv0432/sodC | Rv0312/- | |
| Fe_supp_jason_reseq | 0.606 | 0.638 |
| low_pH_jason_reseq | 0.609 | 0.331 |
| NO_jason_reseq | 0.289 | -0.113 |
| B6_jason_reseq | -1.779 | 0.135 |
| MHCII_jason_reseq | -1.466 | 0.678 |
| Isoniazid02 | -0.554 | 0.533 |
| Rifampicin4 | -1.752 | -2.296 |
| Ethambutol3 | -0.255 | 0.942 |
| Meropenem3 | -0.546 | -0.386 |
| Vancomycin16 | -1.21 | -2.406 |
| Rv2680_day32 | 0.147 | -1.374 |
| H37Rv_KO_MarP | 0.262 | 0.181 |
| hypoxia_3wks | -1.332 | -1.467 |
| hypoxia_6wks | -1.234 | -0.867 |
| glycerol | -0.696 | 0.619 |
| cholesterol | -0.31 | 0.223 |
| AJ | -1.519 | -0.771 |
| Bibs02 | -0.705 | 0.686 |
| Bibs02c | -0.762 | 0.235 |
| BL6 | 0.12 | 0.49 |
| BL6a | -0.257 | 0.264 |
| BXD01 | -0.753 | -0.476 |
| BXD010 | 0.518 | 0.897 |
| BXD011 | -0.25 | 0.297 |
| BXD03 | -0.886 | 0.263 |
| BXD04 | -1.171 | -0.156 |
| BXD05 | -1.014 | -0.135 |
| BXD06 | -0.382 | -0.168 |
| BXD07 | -0.061 | -0.46 |
| BXD08 | -0.54 | -0.358 |
| BXD09 | -0.062 | -0.216 |
| CAST | -1.91 | 0.402 |
| CCcont | 0.402 | 0.746 |
| DS01 | -1.745 | -0.056 |
| DS02 | -0.602 | -0.274 |
| DS04 | -1.872 | -1.228 |
| DS0c | -1.226 | -0.052 |
| GP01 | -0.292 | -0.396 |
| GP02 | -0.491 | 0.255 |
| GP0c | 0.254 | -0.614 |
| NOD | -1.298 | -1.147 |
| NZO | -0.21 | -1.019 |
| PWK | -1.823 | -1.159 |
| H37Rv_KO_CtpC | -0.42 | -0.12 |
| H37Rv_KO_CtpD | 0.185 | -0.03 |
| H37Rv_KO_Rv1272 | -0.697 | -1.022 |
| H37Rv_KO_SugABC | 0.609 | 0.286 |
| H37Rv_KO_MbtN | -0.345 | -0.85 |
| Trans05 | -1.436 | -1.147 |
| macrophage_unactivated | -0.833 | -0.489 |
| IL1 | 0.587 | -0.658 |
| Rapamycin | 0.11 | 0.178 |
| Tcell | 0.117 | 0.094 |
| GMCSF | -0.177 | 0.227 |
| IFNab | 0.193 | -0.372 |
| IFNg | 0.826 | 0.0 |
| IFNg_GMCSF1 | 0.113 | -0.591 |
| Rv1432_day32 | -1.246 | 0.0 |
| Rv1565c_day32 | -2.504 | 0.0 |
| secA2_input | -0.985 | 0.0 |
| delta_Rv3594 | 0.333 | 0.646 |
| delta_Rv3717 | -0.092 | 0.505 |
| delta_Rv3811 | 0.739 | 0.752 |
| delta_Rv0954 | 0.078 | -0.115 |
| PonA1 | 0.615 | 0.653 |
| EccD1_KO | -0.829 | -1.016 |
| EspI_KO | -0.95 | -1.135 |
| PE35_KO | -1.604 | -1.228 |
| PPE68_KO | -1.315 | -0.921 |
| glycerol2 | 0.464 | 2.019 |
| lignocerate | 0.991 | 2.557 |
| oleate | -0.44 | -0.315 |
| phosphatidylcholine | 1.158 | 2.07 |
| acetate | 1.049 | 3.325 |
| glucAc | 0.668 | 2.617 |
| Rv0950ko | 0.479 | 1.668 |
| Rv1096ko | 0.721 | 0.875 |
| Rv3684ko | 0.37 | 0.684 |
| delta_otsA_trehalose | 0.849 | 0.079 |