Top 10 genes with highest correlation to Rv0432/sodC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3535c/hsaG | (cc=0.6046) | info on Rv3535c/hsaG |
| Rv0312/- | (cc=0.5804) | info on Rv0312/- |
| Rv1405c/- | (cc=0.556) | info on Rv1405c/- |
| Rv3550/echA20 | (cc=0.5549) | info on Rv3550/echA20 |
| Rv1590/- | (cc=0.5308) | info on Rv1590/- |
| Rv3873/PPE68 | (cc=0.527) | info on Rv3873/PPE68 |
| Rv3534c/hsaF | (cc=0.5262) | info on Rv3534c/hsaF |
| Rv3502c/- | (cc=0.5135) | info on Rv3502c/- |
| Rv1237/sugB | (cc=0.5105) | info on Rv1237/sugB |
| Rv1109c/- | (cc=0.5085) | info on Rv1109c/- |
Correlation of Rv0432/sodC with Rv3535c/hsaG
Normalized LFCs for Rv0432/sodC:
(description and provenance of datasets)
| Rv0432/sodC | Rv3535c/hsaG | |
| Fe_supp_jason_reseq | 0.606 | -0.714 |
| low_pH_jason_reseq | 0.609 | -0.299 |
| NO_jason_reseq | 0.289 | -0.155 |
| B6_jason_reseq | -1.779 | -1.901 |
| MHCII_jason_reseq | -1.466 | -1.377 |
| Isoniazid02 | -0.554 | 0.869 |
| Rifampicin4 | -1.752 | -0.051 |
| Ethambutol3 | -0.255 | 1.612 |
| Meropenem3 | -0.546 | 0.313 |
| Vancomycin16 | -1.21 | -0.202 |
| Rv2680_day32 | 0.147 | -1.643 |
| H37Rv_KO_MarP | 0.262 | 0.198 |
| hypoxia_3wks | -1.332 | 0.132 |
| hypoxia_6wks | -1.234 | -0.198 |
| glycerol | -0.696 | -0.342 |
| cholesterol | -0.31 | -1.975 |
| AJ | -1.519 | -1.632 |
| Bibs02 | -0.705 | -1.017 |
| Bibs02c | -0.762 | -0.668 |
| BL6 | 0.12 | -0.999 |
| BL6a | -0.257 | -1.033 |
| BXD01 | -0.753 | -1.42 |
| BXD010 | 0.518 | -0.589 |
| BXD011 | -0.25 | -1.777 |
| BXD03 | -0.886 | -0.471 |
| BXD04 | -1.171 | -0.881 |
| BXD05 | -1.014 | -2.219 |
| BXD06 | -0.382 | -1.167 |
| BXD07 | -0.061 | -1.057 |
| BXD08 | -0.54 | -1.112 |
| BXD09 | -0.062 | -1.516 |
| CAST | -1.91 | -2.177 |
| CCcont | 0.402 | -0.138 |
| DS01 | -1.745 | -2.135 |
| DS02 | -0.602 | -0.009 |
| DS04 | -1.872 | -2.586 |
| DS0c | -1.226 | -2.264 |
| GP01 | -0.292 | -1.46 |
| GP02 | -0.491 | -0.506 |
| GP0c | 0.254 | -0.182 |
| NOD | -1.298 | -2.397 |
| NZO | -0.21 | -1.097 |
| PWK | -1.823 | -2.39 |
| H37Rv_KO_CtpC | -0.42 | -2.141 |
| H37Rv_KO_CtpD | 0.185 | -0.583 |
| H37Rv_KO_Rv1272 | -0.697 | -1.289 |
| H37Rv_KO_SugABC | 0.609 | 0.033 |
| H37Rv_KO_MbtN | -0.345 | -0.635 |
| Trans05 | -1.436 | -0.952 |
| macrophage_unactivated | -0.833 | 0.319 |
| IL1 | 0.587 | 0.664 |
| Rapamycin | 0.11 | 0.387 |
| Tcell | 0.117 | -0.45 |
| GMCSF | -0.177 | 0.018 |
| IFNab | 0.193 | -0.06 |
| IFNg | 0.826 | 0.446 |
| IFNg_GMCSF1 | 0.113 | -0.342 |
| Rv1432_day32 | -1.246 | -1.352 |
| Rv1565c_day32 | -2.504 | -2.06 |
| secA2_input | -0.985 | 1.296 |
| delta_Rv3594 | 0.333 | 0.125 |
| delta_Rv3717 | -0.092 | 0.216 |
| delta_Rv3811 | 0.739 | 0.393 |
| delta_Rv0954 | 0.078 | 0.358 |
| PonA1 | 0.615 | 0.391 |
| EccD1_KO | -0.829 | -0.911 |
| EspI_KO | -0.95 | -0.368 |
| PE35_KO | -1.604 | -0.053 |
| PPE68_KO | -1.315 | -0.134 |
| glycerol2 | 0.464 | 0.97 |
| lignocerate | 0.991 | 1.54 |
| oleate | -0.44 | -0.228 |
| phosphatidylcholine | 1.158 | 0.933 |
| acetate | 1.049 | 1.275 |
| glucAc | 0.668 | 1.344 |
| Rv0950ko | 0.479 | 0.66 |
| Rv1096ko | 0.721 | 0.624 |
| Rv3684ko | 0.37 | 1.13 |
| delta_otsA_trehalose | 0.849 | 0.54 |