Top 10 genes with highest correlation to Rv0333/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2643/arsC | (cc=0.549) | info on Rv2643/arsC |
| Rv1108c/xseA | (cc=0.5402) | info on Rv1108c/xseA |
| Rv1164/narI | (cc=0.5361) | info on Rv1164/narI |
| Rv0418/lpqL | (cc=0.5098) | info on Rv0418/lpqL |
| Rv3445c/esxU | (cc=0.5042) | info on Rv3445c/esxU |
| Rv0368c/- | (cc=0.4861) | info on Rv0368c/- |
| Rv1279/- | (cc=0.478) | info on Rv1279/- |
| Rv2629/- | (cc=0.4758) | info on Rv2629/- |
| Rv3395A/- | (cc=0.4758) | info on Rv3395A/- |
| Rv0435c/- | (cc=0.4755) | info on Rv0435c/- |
Correlation of Rv0333/- with Rv3395A/-
Normalized LFCs for Rv0333/-:
(description and provenance of datasets)
| Rv0333/- | Rv3395A/- | |
| Fe_supp_jason_reseq | 0.118 | 0.734 |
| low_pH_jason_reseq | -1.261 | -0.201 |
| NO_jason_reseq | -0.389 | 0.291 |
| B6_jason_reseq | 1.124 | 0.377 |
| MHCII_jason_reseq | 0.143 | 0.695 |
| Isoniazid02 | 1.398 | 2.447 |
| Rifampicin4 | -0.853 | 0.041 |
| Ethambutol3 | 1.0 | 2.29 |
| Meropenem3 | 4.998 | 4.713 |
| Vancomycin16 | -0.048 | -0.162 |
| Rv2680_day32 | 0.23 | -0.192 |
| H37Rv_KO_MarP | -0.896 | -0.247 |
| hypoxia_3wks | -0.203 | -0.359 |
| hypoxia_6wks | 0.282 | -1.222 |
| glycerol | -0.622 | -3.474 |
| cholesterol | 0.222 | -1.141 |
| AJ | -0.419 | -0.18 |
| Bibs02 | 1.237 | -0.707 |
| Bibs02c | -0.105 | 0.105 |
| BL6 | 0.642 | -1.157 |
| BL6a | -0.313 | 0.073 |
| BXD01 | -1.937 | -0.469 |
| BXD010 | -2.664 | -0.807 |
| BXD011 | -0.342 | -0.792 |
| BXD03 | -1.814 | -0.452 |
| BXD04 | -0.905 | -0.242 |
| BXD05 | -0.167 | -0.675 |
| BXD06 | -0.678 | -0.354 |
| BXD07 | -0.613 | -0.803 |
| BXD08 | 0.204 | -1.308 |
| BXD09 | -1.128 | -0.873 |
| CAST | -0.746 | 0.275 |
| CCcont | -0.891 | -0.738 |
| DS01 | 0.121 | 0.13 |
| DS02 | -0.269 | -0.093 |
| DS04 | 0.842 | 0.519 |
| DS0c | -0.49 | -0.214 |
| GP01 | -0.205 | 0.727 |
| GP02 | 0.563 | -0.008 |
| GP0c | -0.613 | -0.594 |
| NOD | -0.249 | 0.68 |
| NZO | 0.426 | -0.227 |
| PWK | 0.776 | 0.226 |
| H37Rv_KO_CtpC | 0.201 | -1.413 |
| H37Rv_KO_CtpD | -2.441 | -0.597 |
| H37Rv_KO_Rv1272 | -1.764 | -0.418 |
| H37Rv_KO_SugABC | 0.934 | -0.281 |
| H37Rv_KO_MbtN | -2.144 | -1.014 |
| Trans05 | -0.917 | -0.129 |
| macrophage_unactivated | 0.186 | -0.325 |
| IL1 | 0.905 | -0.89 |
| Rapamycin | 1.01 | -1.2 |
| Tcell | -0.951 | -0.87 |
| GMCSF | 0.673 | -1.032 |
| IFNab | 0.2 | -1.255 |
| IFNg | 0.492 | -1.173 |
| IFNg_GMCSF1 | -0.047 | -0.572 |
| Rv1432_day32 | 2.117 | 1.027 |
| Rv1565c_day32 | 0.006 | -0.788 |
| secA2_input | 0.485 | -0.553 |
| delta_Rv3594 | -2.109 | -1.182 |
| delta_Rv3717 | -1.453 | -1.258 |
| delta_Rv3811 | -0.995 | -1.019 |
| delta_Rv0954 | -1.093 | 0.045 |
| PonA1 | -0.723 | -0.479 |
| EccD1_KO | 0.569 | -0.441 |
| EspI_KO | 1.554 | -0.134 |
| PE35_KO | -0.359 | -0.102 |
| PPE68_KO | 0.797 | -0.857 |
| glycerol2 | -0.59 | 1.002 |
| lignocerate | -0.022 | 1.508 |
| oleate | 0.051 | 0.203 |
| phosphatidylcholine | 0.148 | 1.144 |
| acetate | 1.303 | 1.398 |
| glucAc | -0.314 | 1.289 |
| Rv0950ko | 0.181 | -0.19 |
| Rv1096ko | 0.884 | 1.252 |
| Rv3684ko | 0.842 | 0.295 |
| delta_otsA_trehalose | -1.479 | 1.284 |