Top 10 genes with highest correlation to Rv0333/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2643/arsC | (cc=0.549) | info on Rv2643/arsC |
| Rv1108c/xseA | (cc=0.5402) | info on Rv1108c/xseA |
| Rv1164/narI | (cc=0.5361) | info on Rv1164/narI |
| Rv0418/lpqL | (cc=0.5098) | info on Rv0418/lpqL |
| Rv3445c/esxU | (cc=0.5042) | info on Rv3445c/esxU |
| Rv0368c/- | (cc=0.4861) | info on Rv0368c/- |
| Rv1279/- | (cc=0.478) | info on Rv1279/- |
| Rv2629/- | (cc=0.4758) | info on Rv2629/- |
| Rv3395A/- | (cc=0.4758) | info on Rv3395A/- |
| Rv0435c/- | (cc=0.4755) | info on Rv0435c/- |
Correlation of Rv0333/- with Rv0368c/-
Normalized LFCs for Rv0333/-:
(description and provenance of datasets)
| Rv0333/- | Rv0368c/- | |
| Fe_supp_jason_reseq | 0.118 | -0.332 |
| low_pH_jason_reseq | -1.261 | -0.286 |
| NO_jason_reseq | -0.389 | 0.299 |
| B6_jason_reseq | 1.124 | 0.538 |
| MHCII_jason_reseq | 0.143 | -0.422 |
| Isoniazid02 | 1.398 | 0.175 |
| Rifampicin4 | -0.853 | -0.13 |
| Ethambutol3 | 1.0 | -0.022 |
| Meropenem3 | 4.998 | 1.349 |
| Vancomycin16 | -0.048 | -0.597 |
| Rv2680_day32 | 0.23 | 0.544 |
| H37Rv_KO_MarP | -0.896 | -0.196 |
| hypoxia_3wks | -0.203 | 0.199 |
| hypoxia_6wks | 0.282 | -0.086 |
| glycerol | -0.622 | 0.851 |
| cholesterol | 0.222 | 0.168 |
| AJ | -0.419 | 0.071 |
| Bibs02 | 1.237 | 0.232 |
| Bibs02c | -0.105 | -0.079 |
| BL6 | 0.642 | -0.188 |
| BL6a | -0.313 | -0.204 |
| BXD01 | -1.937 | -0.405 |
| BXD010 | -2.664 | -0.337 |
| BXD011 | -0.342 | -0.869 |
| BXD03 | -1.814 | -0.831 |
| BXD04 | -0.905 | -0.631 |
| BXD05 | -0.167 | -0.156 |
| BXD06 | -0.678 | -0.394 |
| BXD07 | -0.613 | -0.43 |
| BXD08 | 0.204 | -0.101 |
| BXD09 | -1.128 | -0.38 |
| CAST | -0.746 | 0.028 |
| CCcont | -0.891 | -0.29 |
| DS01 | 0.121 | 0.195 |
| DS02 | -0.269 | -0.224 |
| DS04 | 0.842 | 0.426 |
| DS0c | -0.49 | 0.079 |
| GP01 | -0.205 | -0.617 |
| GP02 | 0.563 | 0.313 |
| GP0c | -0.613 | -0.332 |
| NOD | -0.249 | -0.735 |
| NZO | 0.426 | -0.231 |
| PWK | 0.776 | 0.341 |
| H37Rv_KO_CtpC | 0.201 | -1.422 |
| H37Rv_KO_CtpD | -2.441 | 0.34 |
| H37Rv_KO_Rv1272 | -1.764 | -0.93 |
| H37Rv_KO_SugABC | 0.934 | 0.532 |
| H37Rv_KO_MbtN | -2.144 | 0.073 |
| Trans05 | -0.917 | 0.016 |
| macrophage_unactivated | 0.186 | -0.404 |
| IL1 | 0.905 | 0.083 |
| Rapamycin | 1.01 | -0.028 |
| Tcell | -0.951 | -0.554 |
| GMCSF | 0.673 | 0.024 |
| IFNab | 0.2 | 0.085 |
| IFNg | 0.492 | -0.289 |
| IFNg_GMCSF1 | -0.047 | -0.028 |
| Rv1432_day32 | 2.117 | 2.136 |
| Rv1565c_day32 | 0.006 | -0.655 |
| secA2_input | 0.485 | 0.269 |
| delta_Rv3594 | -2.109 | 0.104 |
| delta_Rv3717 | -1.453 | 0.109 |
| delta_Rv3811 | -0.995 | -0.754 |
| delta_Rv0954 | -1.093 | 0.026 |
| PonA1 | -0.723 | 0.235 |
| EccD1_KO | 0.569 | 0.28 |
| EspI_KO | 1.554 | 0.396 |
| PE35_KO | -0.359 | -0.475 |
| PPE68_KO | 0.797 | -0.467 |
| glycerol2 | -0.59 | 0.147 |
| lignocerate | -0.022 | 0.351 |
| oleate | 0.051 | 0.301 |
| phosphatidylcholine | 0.148 | 0.095 |
| acetate | 1.303 | 0.081 |
| glucAc | -0.314 | -0.01 |
| Rv0950ko | 0.181 | 0.742 |
| Rv1096ko | 0.884 | 1.098 |
| Rv3684ko | 0.842 | 0.521 |
| delta_otsA_trehalose | -1.479 | 0.2 |