Top 10 genes with highest correlation to Rv0333/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2643/arsC | (cc=0.549) | info on Rv2643/arsC |
| Rv1108c/xseA | (cc=0.5402) | info on Rv1108c/xseA |
| Rv1164/narI | (cc=0.5361) | info on Rv1164/narI |
| Rv0418/lpqL | (cc=0.5098) | info on Rv0418/lpqL |
| Rv3445c/esxU | (cc=0.5042) | info on Rv3445c/esxU |
| Rv0368c/- | (cc=0.4861) | info on Rv0368c/- |
| Rv1279/- | (cc=0.478) | info on Rv1279/- |
| Rv2629/- | (cc=0.4758) | info on Rv2629/- |
| Rv3395A/- | (cc=0.4758) | info on Rv3395A/- |
| Rv0435c/- | (cc=0.4755) | info on Rv0435c/- |
Correlation of Rv0333/- with Rv1164/narI
Normalized LFCs for Rv0333/-:
(description and provenance of datasets)
| Rv0333/- | Rv1164/narI | |
| Fe_supp_jason_reseq | 0.118 | 0.366 |
| low_pH_jason_reseq | -1.261 | -0.547 |
| NO_jason_reseq | -0.389 | 0.105 |
| B6_jason_reseq | 1.124 | -1.121 |
| MHCII_jason_reseq | 0.143 | -0.146 |
| Isoniazid02 | 1.398 | -0.154 |
| Rifampicin4 | -0.853 | -0.087 |
| Ethambutol3 | 1.0 | 1.415 |
| Meropenem3 | 4.998 | 3.012 |
| Vancomycin16 | -0.048 | -0.106 |
| Rv2680_day32 | 0.23 | 0.145 |
| H37Rv_KO_MarP | -0.896 | 0.588 |
| hypoxia_3wks | -0.203 | 0.502 |
| hypoxia_6wks | 0.282 | 0.111 |
| glycerol | -0.622 | -0.633 |
| cholesterol | 0.222 | -0.141 |
| AJ | -0.419 | 0.879 |
| Bibs02 | 1.237 | 0.281 |
| Bibs02c | -0.105 | -0.056 |
| BL6 | 0.642 | -0.306 |
| BL6a | -0.313 | 0.382 |
| BXD01 | -1.937 | -0.297 |
| BXD010 | -2.664 | 0.261 |
| BXD011 | -0.342 | 0.144 |
| BXD03 | -1.814 | -0.275 |
| BXD04 | -0.905 | -0.492 |
| BXD05 | -0.167 | 0.282 |
| BXD06 | -0.678 | -0.101 |
| BXD07 | -0.613 | 0.097 |
| BXD08 | 0.204 | 0.369 |
| BXD09 | -1.128 | 0.116 |
| CAST | -0.746 | 0.0 |
| CCcont | -0.891 | -0.188 |
| DS01 | 0.121 | -0.096 |
| DS02 | -0.269 | -0.34 |
| DS04 | 0.842 | 0.406 |
| DS0c | -0.49 | 0.085 |
| GP01 | -0.205 | 0.591 |
| GP02 | 0.563 | 0.459 |
| GP0c | -0.613 | -0.635 |
| NOD | -0.249 | -0.138 |
| NZO | 0.426 | -0.179 |
| PWK | 0.776 | -0.162 |
| H37Rv_KO_CtpC | 0.201 | 1.16 |
| H37Rv_KO_CtpD | -2.441 | 0.05 |
| H37Rv_KO_Rv1272 | -1.764 | 0.028 |
| H37Rv_KO_SugABC | 0.934 | 1.027 |
| H37Rv_KO_MbtN | -2.144 | -0.085 |
| Trans05 | -0.917 | -0.108 |
| macrophage_unactivated | 0.186 | -0.025 |
| IL1 | 0.905 | -0.113 |
| Rapamycin | 1.01 | 0.442 |
| Tcell | -0.951 | -0.388 |
| GMCSF | 0.673 | 0.811 |
| IFNab | 0.2 | 0.435 |
| IFNg | 0.492 | 0.633 |
| IFNg_GMCSF1 | -0.047 | -0.27 |
| Rv1432_day32 | 2.117 | -0.017 |
| Rv1565c_day32 | 0.006 | 0.477 |
| secA2_input | 0.485 | -0.225 |
| delta_Rv3594 | -2.109 | -1.014 |
| delta_Rv3717 | -1.453 | -1.274 |
| delta_Rv3811 | -0.995 | -1.06 |
| delta_Rv0954 | -1.093 | -0.337 |
| PonA1 | -0.723 | -1.005 |
| EccD1_KO | 0.569 | 0.855 |
| EspI_KO | 1.554 | 0.568 |
| PE35_KO | -0.359 | 0.373 |
| PPE68_KO | 0.797 | 0.589 |
| glycerol2 | -0.59 | -0.035 |
| lignocerate | -0.022 | 0.086 |
| oleate | 0.051 | 0.542 |
| phosphatidylcholine | 0.148 | 0.266 |
| acetate | 1.303 | -0.241 |
| glucAc | -0.314 | -0.187 |
| Rv0950ko | 0.181 | 0.163 |
| Rv1096ko | 0.884 | 0.299 |
| Rv3684ko | 0.842 | -0.635 |
| delta_otsA_trehalose | -1.479 | -0.57 |