Top 10 genes with highest correlation to Rv0125/pepA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0677c/mmpS5 | (cc=0.5289) | info on Rv0677c/mmpS5 |
| Rv2217/lipB | (cc=0.4861) | info on Rv2217/lipB |
| Rv0392c/ndhA | (cc=0.4671) | info on Rv0392c/ndhA |
| Rv3661/- | (cc=0.4616) | info on Rv3661/- |
| Rv0998/- | (cc=0.4524) | info on Rv0998/- |
| Rv0597c/- | (cc=0.4411) | info on Rv0597c/- |
| Rv2116/lppK | (cc=0.4363) | info on Rv2116/lppK |
| Rv0038/- | (cc=0.4349) | info on Rv0038/- |
| Rv2366c/- | (cc=0.4213) | info on Rv2366c/- |
| Rv0631c/recC | (cc=0.4211) | info on Rv0631c/recC |
Correlation of Rv0125/pepA with Rv2366c/-
Normalized LFCs for Rv0125/pepA:
(description and provenance of datasets)
| Rv0125/pepA | Rv2366c/- | |
| Fe_supp_jason_reseq | -0.358 | 0.207 |
| low_pH_jason_reseq | -0.261 | -0.979 |
| NO_jason_reseq | -0.672 | -1.672 |
| B6_jason_reseq | -1.208 | -0.538 |
| MHCII_jason_reseq | -0.294 | 0.26 |
| Isoniazid02 | 0.186 | -0.159 |
| Rifampicin4 | 0.785 | 0.417 |
| Ethambutol3 | 1.408 | 0.251 |
| Meropenem3 | 1.628 | 0.34 |
| Vancomycin16 | -0.371 | 0.297 |
| Rv2680_day32 | 0.33 | 0.227 |
| H37Rv_KO_MarP | -0.363 | 0.986 |
| hypoxia_3wks | 0.207 | 0.299 |
| hypoxia_6wks | -0.967 | 0.0 |
| glycerol | -0.625 | 0.246 |
| cholesterol | -0.415 | -0.047 |
| AJ | -0.518 | -0.35 |
| Bibs02 | 0.588 | 0.0 |
| Bibs02c | 0.903 | 0.255 |
| BL6 | -0.011 | 0.393 |
| BL6a | -0.342 | 0.406 |
| BXD01 | 0.202 | -0.797 |
| BXD010 | -0.246 | -0.014 |
| BXD011 | 0.216 | -0.257 |
| BXD03 | -0.359 | -0.679 |
| BXD04 | 0.45 | 0.286 |
| BXD05 | 0.044 | 0.575 |
| BXD06 | 0.033 | -0.359 |
| BXD07 | -0.525 | 0.196 |
| BXD08 | -0.243 | -0.119 |
| BXD09 | -0.388 | -0.143 |
| CAST | -0.928 | -0.127 |
| CCcont | 0.12 | 0.306 |
| DS01 | 0.433 | -1.027 |
| DS02 | 0.29 | -1.85 |
| DS04 | 1.397 | 0.18 |
| DS0c | 0.321 | 0.201 |
| GP01 | 0.62 | 0.0 |
| GP02 | -0.832 | 0.009 |
| GP0c | 0.135 | 0.527 |
| NOD | 0.475 | 0.519 |
| NZO | 0.366 | 0.0 |
| PWK | -1.279 | 0.021 |
| H37Rv_KO_CtpC | -0.985 | 0.052 |
| H37Rv_KO_CtpD | 0.392 | 0.514 |
| H37Rv_KO_Rv1272 | -0.604 | -0.34 |
| H37Rv_KO_SugABC | 0.049 | -0.645 |
| H37Rv_KO_MbtN | -0.148 | 0.611 |
| Trans05 | -0.022 | 0.325 |
| macrophage_unactivated | -0.761 | -0.496 |
| IL1 | 0.122 | 0.421 |
| Rapamycin | 0.0 | 0.675 |
| Tcell | -0.427 | -0.098 |
| GMCSF | -0.15 | 0.267 |
| IFNab | 0.732 | 0.221 |
| IFNg | -0.23 | 0.449 |
| IFNg_GMCSF1 | -0.088 | 0.0 |
| Rv1432_day32 | -0.763 | -0.884 |
| Rv1565c_day32 | -0.509 | -1.055 |
| secA2_input | 0.961 | 0.717 |
| delta_Rv3594 | 0.511 | 1.715 |
| delta_Rv3717 | 1.208 | 0.965 |
| delta_Rv3811 | 1.136 | 0.882 |
| delta_Rv0954 | 1.003 | 1.877 |
| PonA1 | 0.757 | -0.286 |
| EccD1_KO | -0.674 | 0.671 |
| EspI_KO | 0.402 | 0.471 |
| PE35_KO | -0.779 | 0.405 |
| PPE68_KO | -0.278 | 0.093 |
| glycerol2 | -1.115 | -0.165 |
| lignocerate | -1.42 | -2.908 |
| oleate | -1.109 | -0.74 |
| phosphatidylcholine | -0.702 | -1.333 |
| acetate | -0.176 | 0.419 |
| glucAc | -0.65 | 0.174 |
| Rv0950ko | 0.383 | 0.042 |
| Rv1096ko | 0.341 | -0.256 |
| Rv3684ko | 0.501 | -0.092 |
| delta_otsA_trehalose | -0.382 | -0.095 |