Top 10 genes with highest correlation to Rv0125/pepA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0677c/mmpS5 | (cc=0.5289) | info on Rv0677c/mmpS5 |
| Rv2217/lipB | (cc=0.4861) | info on Rv2217/lipB |
| Rv0392c/ndhA | (cc=0.4671) | info on Rv0392c/ndhA |
| Rv3661/- | (cc=0.4616) | info on Rv3661/- |
| Rv0998/- | (cc=0.4524) | info on Rv0998/- |
| Rv0597c/- | (cc=0.4411) | info on Rv0597c/- |
| Rv2116/lppK | (cc=0.4363) | info on Rv2116/lppK |
| Rv0038/- | (cc=0.4349) | info on Rv0038/- |
| Rv2366c/- | (cc=0.4213) | info on Rv2366c/- |
| Rv0631c/recC | (cc=0.4211) | info on Rv0631c/recC |
Correlation of Rv0125/pepA with Rv0998/-
Normalized LFCs for Rv0125/pepA:
(description and provenance of datasets)
| Rv0125/pepA | Rv0998/- | |
| Fe_supp_jason_reseq | -0.358 | 3.157 |
| low_pH_jason_reseq | -0.261 | 0.231 |
| NO_jason_reseq | -0.672 | 0.0 |
| B6_jason_reseq | -1.208 | 0.153 |
| MHCII_jason_reseq | -0.294 | 0.0 |
| Isoniazid02 | 0.186 | -1.641 |
| Rifampicin4 | 0.785 | -0.68 |
| Ethambutol3 | 1.408 | 0.541 |
| Meropenem3 | 1.628 | 1.265 |
| Vancomycin16 | -0.371 | -0.889 |
| Rv2680_day32 | 0.33 | 0.0 |
| H37Rv_KO_MarP | -0.363 | -1.233 |
| hypoxia_3wks | 0.207 | 4.103 |
| hypoxia_6wks | -0.967 | -2.211 |
| glycerol | -0.625 | 4.299 |
| cholesterol | -0.415 | 2.403 |
| AJ | -0.518 | -1.425 |
| Bibs02 | 0.588 | 1.216 |
| Bibs02c | 0.903 | 2.004 |
| BL6 | -0.011 | -0.768 |
| BL6a | -0.342 | 0.762 |
| BXD01 | 0.202 | -0.8 |
| BXD010 | -0.246 | -0.787 |
| BXD011 | 0.216 | -0.655 |
| BXD03 | -0.359 | -0.831 |
| BXD04 | 0.45 | -0.76 |
| BXD05 | 0.044 | -0.457 |
| BXD06 | 0.033 | -0.82 |
| BXD07 | -0.525 | -0.851 |
| BXD08 | -0.243 | -0.817 |
| BXD09 | -0.388 | -0.863 |
| CAST | -0.928 | -0.782 |
| CCcont | 0.12 | 2.422 |
| DS01 | 0.433 | 2.421 |
| DS02 | 0.29 | 0.0 |
| DS04 | 1.397 | 1.903 |
| DS0c | 0.321 | 2.176 |
| GP01 | 0.62 | -0.607 |
| GP02 | -0.832 | -0.511 |
| GP0c | 0.135 | -0.799 |
| NOD | 0.475 | -0.591 |
| NZO | 0.366 | -1.225 |
| PWK | -1.279 | -1.205 |
| H37Rv_KO_CtpC | -0.985 | -0.552 |
| H37Rv_KO_CtpD | 0.392 | -0.43 |
| H37Rv_KO_Rv1272 | -0.604 | -0.725 |
| H37Rv_KO_SugABC | 0.049 | 0.254 |
| H37Rv_KO_MbtN | -0.148 | -0.127 |
| Trans05 | -0.022 | -0.672 |
| macrophage_unactivated | -0.761 | -0.884 |
| IL1 | 0.122 | -1.863 |
| Rapamycin | 0.0 | -1.927 |
| Tcell | -0.427 | -0.912 |
| GMCSF | -0.15 | -2.022 |
| IFNab | 0.732 | -0.547 |
| IFNg | -0.23 | -1.678 |
| IFNg_GMCSF1 | -0.088 | -2.407 |
| Rv1432_day32 | -0.763 | -0.343 |
| Rv1565c_day32 | -0.509 | 1.071 |
| secA2_input | 0.961 | 0.302 |
| delta_Rv3594 | 0.511 | 4.054 |
| delta_Rv3717 | 1.208 | 4.344 |
| delta_Rv3811 | 1.136 | 3.679 |
| delta_Rv0954 | 1.003 | 2.505 |
| PonA1 | 0.757 | 2.734 |
| EccD1_KO | -0.674 | -3.588 |
| EspI_KO | 0.402 | -1.711 |
| PE35_KO | -0.779 | -1.928 |
| PPE68_KO | -0.278 | -2.473 |
| glycerol2 | -1.115 | -4.482 |
| lignocerate | -1.42 | -4.062 |
| oleate | -1.109 | -4.73 |
| phosphatidylcholine | -0.702 | -4.143 |
| acetate | -0.176 | -0.023 |
| glucAc | -0.65 | 0.043 |
| Rv0950ko | 0.383 | -3.435 |
| Rv1096ko | 0.341 | -2.781 |
| Rv3684ko | 0.501 | -2.967 |
| delta_otsA_trehalose | -0.382 | -0.788 |