Top 10 genes with highest correlation to Rv0125/pepA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0677c/mmpS5 | (cc=0.5289) | info on Rv0677c/mmpS5 |
| Rv2217/lipB | (cc=0.4861) | info on Rv2217/lipB |
| Rv0392c/ndhA | (cc=0.4671) | info on Rv0392c/ndhA |
| Rv3661/- | (cc=0.4616) | info on Rv3661/- |
| Rv0998/- | (cc=0.4524) | info on Rv0998/- |
| Rv0597c/- | (cc=0.4411) | info on Rv0597c/- |
| Rv2116/lppK | (cc=0.4363) | info on Rv2116/lppK |
| Rv0038/- | (cc=0.4349) | info on Rv0038/- |
| Rv2366c/- | (cc=0.4213) | info on Rv2366c/- |
| Rv0631c/recC | (cc=0.4211) | info on Rv0631c/recC |
Correlation of Rv0125/pepA with Rv0597c/-
Normalized LFCs for Rv0125/pepA:
(description and provenance of datasets)
| Rv0125/pepA | Rv0597c/- | |
| Fe_supp_jason_reseq | -0.358 | 0.055 |
| low_pH_jason_reseq | -0.261 | -0.475 |
| NO_jason_reseq | -0.672 | 0.462 |
| B6_jason_reseq | -1.208 | 0.441 |
| MHCII_jason_reseq | -0.294 | 0.781 |
| Isoniazid02 | 0.186 | -0.413 |
| Rifampicin4 | 0.785 | -0.246 |
| Ethambutol3 | 1.408 | 2.546 |
| Meropenem3 | 1.628 | 2.047 |
| Vancomycin16 | -0.371 | -0.159 |
| Rv2680_day32 | 0.33 | -0.021 |
| H37Rv_KO_MarP | -0.363 | 0.2 |
| hypoxia_3wks | 0.207 | 0.331 |
| hypoxia_6wks | -0.967 | 0.543 |
| glycerol | -0.625 | 0.334 |
| cholesterol | -0.415 | -0.132 |
| AJ | -0.518 | 0.071 |
| Bibs02 | 0.588 | 0.535 |
| Bibs02c | 0.903 | -0.132 |
| BL6 | -0.011 | -0.63 |
| BL6a | -0.342 | -0.964 |
| BXD01 | 0.202 | -0.512 |
| BXD010 | -0.246 | -0.476 |
| BXD011 | 0.216 | -0.54 |
| BXD03 | -0.359 | -0.542 |
| BXD04 | 0.45 | -0.398 |
| BXD05 | 0.044 | -0.386 |
| BXD06 | 0.033 | -0.357 |
| BXD07 | -0.525 | -0.505 |
| BXD08 | -0.243 | 0.154 |
| BXD09 | -0.388 | -0.731 |
| CAST | -0.928 | 0.148 |
| CCcont | 0.12 | -0.936 |
| DS01 | 0.433 | -0.392 |
| DS02 | 0.29 | -0.482 |
| DS04 | 1.397 | 0.554 |
| DS0c | 0.321 | 0.171 |
| GP01 | 0.62 | 0.494 |
| GP02 | -0.832 | 0.928 |
| GP0c | 0.135 | 0.065 |
| NOD | 0.475 | 0.693 |
| NZO | 0.366 | -0.273 |
| PWK | -1.279 | -0.179 |
| H37Rv_KO_CtpC | -0.985 | -0.424 |
| H37Rv_KO_CtpD | 0.392 | -0.033 |
| H37Rv_KO_Rv1272 | -0.604 | -0.722 |
| H37Rv_KO_SugABC | 0.049 | 0.41 |
| H37Rv_KO_MbtN | -0.148 | -1.183 |
| Trans05 | -0.022 | -0.202 |
| macrophage_unactivated | -0.761 | -0.881 |
| IL1 | 0.122 | -0.089 |
| Rapamycin | 0.0 | -0.341 |
| Tcell | -0.427 | -1.31 |
| GMCSF | -0.15 | -0.053 |
| IFNab | 0.732 | 0.115 |
| IFNg | -0.23 | -0.107 |
| IFNg_GMCSF1 | -0.088 | -0.349 |
| Rv1432_day32 | -0.763 | -0.63 |
| Rv1565c_day32 | -0.509 | 0.355 |
| secA2_input | 0.961 | 0.28 |
| delta_Rv3594 | 0.511 | 0.167 |
| delta_Rv3717 | 1.208 | 0.111 |
| delta_Rv3811 | 1.136 | 0.284 |
| delta_Rv0954 | 1.003 | 0.488 |
| PonA1 | 0.757 | 0.899 |
| EccD1_KO | -0.674 | -0.914 |
| EspI_KO | 0.402 | -0.984 |
| PE35_KO | -0.779 | -1.175 |
| PPE68_KO | -0.278 | -0.854 |
| glycerol2 | -1.115 | -0.474 |
| lignocerate | -1.42 | -0.623 |
| oleate | -1.109 | 0.069 |
| phosphatidylcholine | -0.702 | -0.28 |
| acetate | -0.176 | -1.101 |
| glucAc | -0.65 | -0.872 |
| Rv0950ko | 0.383 | 1.146 |
| Rv1096ko | 0.341 | 1.288 |
| Rv3684ko | 0.501 | 1.582 |
| delta_otsA_trehalose | -0.382 | -0.504 |