Top 10 genes with highest correlation to Rv0125/pepA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0677c/mmpS5 | (cc=0.5289) | info on Rv0677c/mmpS5 |
| Rv2217/lipB | (cc=0.4861) | info on Rv2217/lipB |
| Rv0392c/ndhA | (cc=0.4671) | info on Rv0392c/ndhA |
| Rv3661/- | (cc=0.4616) | info on Rv3661/- |
| Rv0998/- | (cc=0.4524) | info on Rv0998/- |
| Rv0597c/- | (cc=0.4411) | info on Rv0597c/- |
| Rv2116/lppK | (cc=0.4363) | info on Rv2116/lppK |
| Rv0038/- | (cc=0.4349) | info on Rv0038/- |
| Rv2366c/- | (cc=0.4213) | info on Rv2366c/- |
| Rv0631c/recC | (cc=0.4211) | info on Rv0631c/recC |
Correlation of Rv0125/pepA with Rv0677c/mmpS5
Normalized LFCs for Rv0125/pepA:
(description and provenance of datasets)
| Rv0125/pepA | Rv0677c/mmpS5 | |
| Fe_supp_jason_reseq | -0.358 | 0.357 |
| low_pH_jason_reseq | -0.261 | -0.286 |
| NO_jason_reseq | -0.672 | -0.79 |
| B6_jason_reseq | -1.208 | -0.236 |
| MHCII_jason_reseq | -0.294 | -1.056 |
| Isoniazid02 | 0.186 | 0.028 |
| Rifampicin4 | 0.785 | 0.135 |
| Ethambutol3 | 1.408 | 1.516 |
| Meropenem3 | 1.628 | 0.846 |
| Vancomycin16 | -0.371 | -0.241 |
| Rv2680_day32 | 0.33 | -0.947 |
| H37Rv_KO_MarP | -0.363 | 0.387 |
| hypoxia_3wks | 0.207 | 0.327 |
| hypoxia_6wks | -0.967 | -0.641 |
| glycerol | -0.625 | -2.384 |
| cholesterol | -0.415 | -2.068 |
| AJ | -0.518 | 0.303 |
| Bibs02 | 0.588 | -0.58 |
| Bibs02c | 0.903 | 1.222 |
| BL6 | -0.011 | -2.709 |
| BL6a | -0.342 | 0.948 |
| BXD01 | 0.202 | -0.293 |
| BXD010 | -0.246 | -0.382 |
| BXD011 | 0.216 | 0.104 |
| BXD03 | -0.359 | -0.217 |
| BXD04 | 0.45 | -0.447 |
| BXD05 | 0.044 | 0.689 |
| BXD06 | 0.033 | -0.58 |
| BXD07 | -0.525 | -0.936 |
| BXD08 | -0.243 | -0.682 |
| BXD09 | -0.388 | 0.148 |
| CAST | -0.928 | 0.264 |
| CCcont | 0.12 | -2.355 |
| DS01 | 0.433 | 0.802 |
| DS02 | 0.29 | -0.499 |
| DS04 | 1.397 | 1.37 |
| DS0c | 0.321 | 0.349 |
| GP01 | 0.62 | -1.113 |
| GP02 | -0.832 | -1.368 |
| GP0c | 0.135 | -0.381 |
| NOD | 0.475 | -0.049 |
| NZO | 0.366 | 0.48 |
| PWK | -1.279 | 0.531 |
| H37Rv_KO_CtpC | -0.985 | -1.065 |
| H37Rv_KO_CtpD | 0.392 | 0.646 |
| H37Rv_KO_Rv1272 | -0.604 | -0.222 |
| H37Rv_KO_SugABC | 0.049 | -0.055 |
| H37Rv_KO_MbtN | -0.148 | -1.516 |
| Trans05 | -0.022 | -0.655 |
| macrophage_unactivated | -0.761 | 0.0 |
| IL1 | 0.122 | 0.89 |
| Rapamycin | 0.0 | 1.335 |
| Tcell | -0.427 | 0.15 |
| GMCSF | -0.15 | 0.053 |
| IFNab | 0.732 | 0.496 |
| IFNg | -0.23 | -0.163 |
| IFNg_GMCSF1 | -0.088 | -0.236 |
| Rv1432_day32 | -0.763 | -0.012 |
| Rv1565c_day32 | -0.509 | 0.575 |
| secA2_input | 0.961 | 0.7 |
| delta_Rv3594 | 0.511 | 1.715 |
| delta_Rv3717 | 1.208 | 0.946 |
| delta_Rv3811 | 1.136 | 1.401 |
| delta_Rv0954 | 1.003 | 1.522 |
| PonA1 | 0.757 | 2.022 |
| EccD1_KO | -0.674 | -0.562 |
| EspI_KO | 0.402 | -0.753 |
| PE35_KO | -0.779 | -0.846 |
| PPE68_KO | -0.278 | -0.909 |
| glycerol2 | -1.115 | -3.496 |
| lignocerate | -1.42 | -1.743 |
| oleate | -1.109 | -4.065 |
| phosphatidylcholine | -0.702 | -1.274 |
| acetate | -0.176 | -0.638 |
| glucAc | -0.65 | -3.253 |
| Rv0950ko | 0.383 | -0.492 |
| Rv1096ko | 0.341 | 0.878 |
| Rv3684ko | 0.501 | -0.93 |
| delta_otsA_trehalose | -0.382 | 1.185 |