Top 10 genes with highest correlation to Rv0097/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0101/nrp | (cc=0.8705) | info on Rv0101/nrp |
| Rv2069/sigC | (cc=0.826) | info on Rv2069/sigC |
| Rv0099/fadD10 | (cc=0.8068) | info on Rv0099/fadD10 |
| Rv0100/- | (cc=0.7997) | info on Rv0100/- |
| Rv0096/PPE1 | (cc=0.7665) | info on Rv0096/PPE1 |
| Rv0098/fcoT | (cc=0.7585) | info on Rv0098/fcoT |
| Rv3868/eccA1 | (cc=0.6347) | info on Rv3868/eccA1 |
| Rv1109c/- | (cc=0.6161) | info on Rv1109c/- |
| Rv3564/fadE33 | (cc=0.6086) | info on Rv3564/fadE33 |
| Rv1235/lpqY | (cc=0.5983) | info on Rv1235/lpqY |
Correlation of Rv0097/- with Rv2069/sigC
Normalized LFCs for Rv0097/-:
(description and provenance of datasets)
| Rv0097/- | Rv2069/sigC | |
| Fe_supp_jason_reseq | 0.368 | -0.128 |
| low_pH_jason_reseq | 0.144 | -0.119 |
| NO_jason_reseq | 0.732 | 0.462 |
| B6_jason_reseq | -1.389 | -2.033 |
| MHCII_jason_reseq | -3.153 | -3.645 |
| Isoniazid02 | 0.063 | -0.362 |
| Rifampicin4 | 0.03 | 0.309 |
| Ethambutol3 | 0.052 | -0.439 |
| Meropenem3 | 0.859 | -1.061 |
| Vancomycin16 | 0.252 | -0.47 |
| Rv2680_day32 | -2.692 | -2.541 |
| H37Rv_KO_MarP | 0.72 | -0.037 |
| hypoxia_3wks | 0.391 | -0.455 |
| hypoxia_6wks | 0.242 | -0.576 |
| glycerol | 0.354 | -0.085 |
| cholesterol | -0.457 | 0.617 |
| AJ | -4.242 | -5.946 |
| Bibs02 | -0.948 | -2.356 |
| Bibs02c | -0.418 | -0.18 |
| BL6 | -0.306 | -1.445 |
| BL6a | -0.885 | -1.238 |
| BXD01 | -0.657 | -1.302 |
| BXD010 | -0.187 | -1.236 |
| BXD011 | -0.45 | -1.081 |
| BXD03 | -0.427 | -1.843 |
| BXD04 | 0.999 | 0.16 |
| BXD05 | -0.254 | -1.081 |
| BXD06 | -1.029 | -2.687 |
| BXD07 | -0.247 | -1.013 |
| BXD08 | -0.153 | -1.029 |
| BXD09 | -0.393 | -1.683 |
| CAST | -3.4 | -5.119 |
| CCcont | 0.425 | 0.587 |
| DS01 | 0.0 | -1.305 |
| DS02 | 2.086 | 1.936 |
| DS04 | -2.042 | -2.282 |
| DS0c | -0.25 | -1.199 |
| GP01 | -1.257 | -1.777 |
| GP02 | -1.566 | -2.008 |
| GP0c | -0.274 | -0.301 |
| NOD | -2.309 | -3.642 |
| NZO | -3.448 | -5.46 |
| PWK | -3.919 | -4.735 |
| H37Rv_KO_CtpC | -0.968 | -1.144 |
| H37Rv_KO_CtpD | 0.47 | -0.641 |
| H37Rv_KO_Rv1272 | -0.313 | -0.508 |
| H37Rv_KO_SugABC | 1.336 | 0.098 |
| H37Rv_KO_MbtN | 1.129 | 0.242 |
| Trans05 | 0.035 | -0.834 |
| macrophage_unactivated | 1.174 | 1.657 |
| IL1 | -1.243 | -2.251 |
| Rapamycin | -1.139 | -1.697 |
| Tcell | 0.896 | -1.03 |
| GMCSF | 0.958 | 0.826 |
| IFNab | 0.952 | 3.217 |
| IFNg | 0.219 | 1.791 |
| IFNg_GMCSF1 | 0.113 | -0.666 |
| Rv1432_day32 | -3.313 | -3.819 |
| Rv1565c_day32 | -3.3 | -2.045 |
| secA2_input | -0.498 | -0.069 |
| delta_Rv3594 | -0.268 | -0.558 |
| delta_Rv3717 | -0.518 | 0.039 |
| delta_Rv3811 | 0.18 | -0.167 |
| delta_Rv0954 | -0.435 | 0.088 |
| PonA1 | -3.519 | -4.903 |
| EccD1_KO | -0.52 | 0.174 |
| EspI_KO | -0.71 | 0.319 |
| PE35_KO | 0.047 | 0.782 |
| PPE68_KO | 0.051 | 0.627 |
| glycerol2 | 0.3 | -3.511 |
| lignocerate | 0.146 | 1.103 |
| oleate | 0.157 | -2.823 |
| phosphatidylcholine | 0.053 | 0.182 |
| acetate | 0.048 | 0.258 |
| glucAc | 0.843 | 0.669 |
| Rv0950ko | 0.597 | -0.069 |
| Rv1096ko | 0.483 | -0.682 |
| Rv3684ko | 0.111 | -0.858 |
| delta_otsA_trehalose | -0.25 | 1.348 |