Top 10 genes with highest correlation to Rv0097/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0101/nrp | (cc=0.8705) | info on Rv0101/nrp |
| Rv2069/sigC | (cc=0.826) | info on Rv2069/sigC |
| Rv0099/fadD10 | (cc=0.8068) | info on Rv0099/fadD10 |
| Rv0100/- | (cc=0.7997) | info on Rv0100/- |
| Rv0096/PPE1 | (cc=0.7665) | info on Rv0096/PPE1 |
| Rv0098/fcoT | (cc=0.7585) | info on Rv0098/fcoT |
| Rv3868/eccA1 | (cc=0.6347) | info on Rv3868/eccA1 |
| Rv1109c/- | (cc=0.6161) | info on Rv1109c/- |
| Rv3564/fadE33 | (cc=0.6086) | info on Rv3564/fadE33 |
| Rv1235/lpqY | (cc=0.5983) | info on Rv1235/lpqY |
Correlation of Rv0097/- with Rv0098/fcoT
Normalized LFCs for Rv0097/-:
(description and provenance of datasets)
| Rv0097/- | Rv0098/fcoT | |
| Fe_supp_jason_reseq | 0.368 | -1.288 |
| low_pH_jason_reseq | 0.144 | -0.261 |
| NO_jason_reseq | 0.732 | -0.656 |
| B6_jason_reseq | -1.389 | -1.004 |
| MHCII_jason_reseq | -3.153 | -2.403 |
| Isoniazid02 | 0.063 | 0.173 |
| Rifampicin4 | 0.03 | -0.349 |
| Ethambutol3 | 0.052 | -0.051 |
| Meropenem3 | 0.859 | -0.21 |
| Vancomycin16 | 0.252 | 0.605 |
| Rv2680_day32 | -2.692 | -1.501 |
| H37Rv_KO_MarP | 0.72 | -0.69 |
| hypoxia_3wks | 0.391 | -0.299 |
| hypoxia_6wks | 0.242 | -0.211 |
| glycerol | 0.354 | -1.612 |
| cholesterol | -0.457 | -0.304 |
| AJ | -4.242 | -3.718 |
| Bibs02 | -0.948 | -1.042 |
| Bibs02c | -0.418 | -0.293 |
| BL6 | -0.306 | -0.936 |
| BL6a | -0.885 | -1.012 |
| BXD01 | -0.657 | -0.522 |
| BXD010 | -0.187 | -0.868 |
| BXD011 | -0.45 | -0.324 |
| BXD03 | -0.427 | -0.856 |
| BXD04 | 0.999 | 0.014 |
| BXD05 | -0.254 | -1.04 |
| BXD06 | -1.029 | -1.502 |
| BXD07 | -0.247 | -0.555 |
| BXD08 | -0.153 | 0.665 |
| BXD09 | -0.393 | -1.313 |
| CAST | -3.4 | -3.821 |
| CCcont | 0.425 | 0.884 |
| DS01 | 0.0 | 0.188 |
| DS02 | 2.086 | 2.163 |
| DS04 | -2.042 | -0.523 |
| DS0c | -0.25 | -0.132 |
| GP01 | -1.257 | -2.056 |
| GP02 | -1.566 | -1.891 |
| GP0c | -0.274 | -1.253 |
| NOD | -2.309 | -3.363 |
| NZO | -3.448 | -3.689 |
| PWK | -3.919 | -3.768 |
| H37Rv_KO_CtpC | -0.968 | -2.278 |
| H37Rv_KO_CtpD | 0.47 | 0.116 |
| H37Rv_KO_Rv1272 | -0.313 | -0.086 |
| H37Rv_KO_SugABC | 1.336 | 1.904 |
| H37Rv_KO_MbtN | 1.129 | -0.567 |
| Trans05 | 0.035 | 0.228 |
| macrophage_unactivated | 1.174 | 1.742 |
| IL1 | -1.243 | -0.801 |
| Rapamycin | -1.139 | -0.258 |
| Tcell | 0.896 | 1.007 |
| GMCSF | 0.958 | 3.332 |
| IFNab | 0.952 | 1.206 |
| IFNg | 0.219 | 0.374 |
| IFNg_GMCSF1 | 0.113 | 1.254 |
| Rv1432_day32 | -3.313 | -1.304 |
| Rv1565c_day32 | -3.3 | -1.164 |
| secA2_input | -0.498 | 0.355 |
| delta_Rv3594 | -0.268 | 0.979 |
| delta_Rv3717 | -0.518 | 0.544 |
| delta_Rv3811 | 0.18 | 1.437 |
| delta_Rv0954 | -0.435 | -0.384 |
| PonA1 | -3.519 | -1.193 |
| EccD1_KO | -0.52 | -0.105 |
| EspI_KO | -0.71 | 0.305 |
| PE35_KO | 0.047 | -0.14 |
| PPE68_KO | 0.051 | 0.15 |
| glycerol2 | 0.3 | -0.043 |
| lignocerate | 0.146 | 0.301 |
| oleate | 0.157 | -0.106 |
| phosphatidylcholine | 0.053 | 0.0 |
| acetate | 0.048 | -0.198 |
| glucAc | 0.843 | 0.042 |
| Rv0950ko | 0.597 | 0.314 |
| Rv1096ko | 0.483 | 0.314 |
| Rv3684ko | 0.111 | -0.763 |
| delta_otsA_trehalose | -0.25 | 1.894 |