Top 10 genes with highest correlation to Rv0097/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0101/nrp | (cc=0.8705) | info on Rv0101/nrp |
| Rv2069/sigC | (cc=0.826) | info on Rv2069/sigC |
| Rv0099/fadD10 | (cc=0.8068) | info on Rv0099/fadD10 |
| Rv0100/- | (cc=0.7997) | info on Rv0100/- |
| Rv0096/PPE1 | (cc=0.7665) | info on Rv0096/PPE1 |
| Rv0098/fcoT | (cc=0.7585) | info on Rv0098/fcoT |
| Rv3868/eccA1 | (cc=0.6347) | info on Rv3868/eccA1 |
| Rv1109c/- | (cc=0.6161) | info on Rv1109c/- |
| Rv3564/fadE33 | (cc=0.6086) | info on Rv3564/fadE33 |
| Rv1235/lpqY | (cc=0.5983) | info on Rv1235/lpqY |
Correlation of Rv0097/- with Rv1109c/-
Normalized LFCs for Rv0097/-:
(description and provenance of datasets)
| Rv0097/- | Rv1109c/- | |
| Fe_supp_jason_reseq | 0.368 | 0.666 |
| low_pH_jason_reseq | 0.144 | -0.069 |
| NO_jason_reseq | 0.732 | -0.837 |
| B6_jason_reseq | -1.389 | -1.372 |
| MHCII_jason_reseq | -3.153 | -0.925 |
| Isoniazid02 | 0.063 | 0.837 |
| Rifampicin4 | 0.03 | -0.636 |
| Ethambutol3 | 0.052 | 0.952 |
| Meropenem3 | 0.859 | 0.329 |
| Vancomycin16 | 0.252 | -0.576 |
| Rv2680_day32 | -2.692 | -0.461 |
| H37Rv_KO_MarP | 0.72 | -0.742 |
| hypoxia_3wks | 0.391 | 0.195 |
| hypoxia_6wks | 0.242 | 0.136 |
| glycerol | 0.354 | 0.983 |
| cholesterol | -0.457 | 0.101 |
| AJ | -4.242 | -2.681 |
| Bibs02 | -0.948 | -1.534 |
| Bibs02c | -0.418 | 0.681 |
| BL6 | -0.306 | 0.261 |
| BL6a | -0.885 | 0.676 |
| BXD01 | -0.657 | 0.339 |
| BXD010 | -0.187 | -0.31 |
| BXD011 | -0.45 | 1.074 |
| BXD03 | -0.427 | -0.722 |
| BXD04 | 0.999 | 0.409 |
| BXD05 | -0.254 | -0.671 |
| BXD06 | -1.029 | -0.229 |
| BXD07 | -0.247 | 0.272 |
| BXD08 | -0.153 | -0.029 |
| BXD09 | -0.393 | 0.189 |
| CAST | -3.4 | -2.611 |
| CCcont | 0.425 | 0.517 |
| DS01 | 0.0 | -0.347 |
| DS02 | 2.086 | 0.334 |
| DS04 | -2.042 | -1.448 |
| DS0c | -0.25 | -1.106 |
| GP01 | -1.257 | -0.426 |
| GP02 | -1.566 | -0.711 |
| GP0c | -0.274 | -0.268 |
| NOD | -2.309 | -2.319 |
| NZO | -3.448 | -1.946 |
| PWK | -3.919 | -2.693 |
| H37Rv_KO_CtpC | -0.968 | 0.091 |
| H37Rv_KO_CtpD | 0.47 | 1.105 |
| H37Rv_KO_Rv1272 | -0.313 | -0.608 |
| H37Rv_KO_SugABC | 1.336 | 0.393 |
| H37Rv_KO_MbtN | 1.129 | 0.285 |
| Trans05 | 0.035 | -0.353 |
| macrophage_unactivated | 1.174 | 1.25 |
| IL1 | -1.243 | 1.258 |
| Rapamycin | -1.139 | 0.506 |
| Tcell | 0.896 | 0.668 |
| GMCSF | 0.958 | 0.177 |
| IFNab | 0.952 | 0.599 |
| IFNg | 0.219 | 0.369 |
| IFNg_GMCSF1 | 0.113 | -0.559 |
| Rv1432_day32 | -3.313 | -2.095 |
| Rv1565c_day32 | -3.3 | -2.199 |
| secA2_input | -0.498 | 1.035 |
| delta_Rv3594 | -0.268 | 1.361 |
| delta_Rv3717 | -0.518 | 0.148 |
| delta_Rv3811 | 0.18 | 0.271 |
| delta_Rv0954 | -0.435 | 1.585 |
| PonA1 | -3.519 | 1.165 |
| EccD1_KO | -0.52 | 1.276 |
| EspI_KO | -0.71 | 0.234 |
| PE35_KO | 0.047 | 0.335 |
| PPE68_KO | 0.051 | 1.241 |
| glycerol2 | 0.3 | 0.154 |
| lignocerate | 0.146 | 0.024 |
| oleate | 0.157 | -0.295 |
| phosphatidylcholine | 0.053 | 0.567 |
| acetate | 0.048 | -0.263 |
| glucAc | 0.843 | -0.264 |
| Rv0950ko | 0.597 | 0.645 |
| Rv1096ko | 0.483 | 0.799 |
| Rv3684ko | 0.111 | -0.236 |
| delta_otsA_trehalose | -0.25 | 1.439 |