Top 10 genes with highest correlation to Rv0097/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0101/nrp | (cc=0.8705) | info on Rv0101/nrp |
| Rv2069/sigC | (cc=0.826) | info on Rv2069/sigC |
| Rv0099/fadD10 | (cc=0.8068) | info on Rv0099/fadD10 |
| Rv0100/- | (cc=0.7997) | info on Rv0100/- |
| Rv0096/PPE1 | (cc=0.7665) | info on Rv0096/PPE1 |
| Rv0098/fcoT | (cc=0.7585) | info on Rv0098/fcoT |
| Rv3868/eccA1 | (cc=0.6347) | info on Rv3868/eccA1 |
| Rv1109c/- | (cc=0.6161) | info on Rv1109c/- |
| Rv3564/fadE33 | (cc=0.6086) | info on Rv3564/fadE33 |
| Rv1235/lpqY | (cc=0.5983) | info on Rv1235/lpqY |
Correlation of Rv0097/- with Rv0101/nrp
Normalized LFCs for Rv0097/-:
(description and provenance of datasets)
| Rv0097/- | Rv0101/nrp | |
| Fe_supp_jason_reseq | 0.368 | -0.475 |
| low_pH_jason_reseq | 0.144 | 0.0 |
| NO_jason_reseq | 0.732 | 0.037 |
| B6_jason_reseq | -1.389 | -1.33 |
| MHCII_jason_reseq | -3.153 | -2.431 |
| Isoniazid02 | 0.063 | 0.493 |
| Rifampicin4 | 0.03 | -0.319 |
| Ethambutol3 | 0.052 | 0.604 |
| Meropenem3 | 0.859 | 0.788 |
| Vancomycin16 | 0.252 | -0.154 |
| Rv2680_day32 | -2.692 | -2.166 |
| H37Rv_KO_MarP | 0.72 | 0.257 |
| hypoxia_3wks | 0.391 | 0.06 |
| hypoxia_6wks | 0.242 | 0.0 |
| glycerol | 0.354 | -0.037 |
| cholesterol | -0.457 | 1.361 |
| AJ | -4.242 | -3.82 |
| Bibs02 | -0.948 | -1.358 |
| Bibs02c | -0.418 | -0.732 |
| BL6 | -0.306 | -1.049 |
| BL6a | -0.885 | -1.621 |
| BXD01 | -0.657 | -1.449 |
| BXD010 | -0.187 | -0.882 |
| BXD011 | -0.45 | -1.018 |
| BXD03 | -0.427 | -0.908 |
| BXD04 | 0.999 | -1.14 |
| BXD05 | -0.254 | -0.904 |
| BXD06 | -1.029 | -1.934 |
| BXD07 | -0.247 | -1.08 |
| BXD08 | -0.153 | -0.433 |
| BXD09 | -0.393 | -1.564 |
| CAST | -3.4 | -3.177 |
| CCcont | 0.425 | -0.599 |
| DS01 | 0.0 | 0.337 |
| DS02 | 2.086 | 1.878 |
| DS04 | -2.042 | -1.789 |
| DS0c | -0.25 | -0.226 |
| GP01 | -1.257 | -1.073 |
| GP02 | -1.566 | -1.148 |
| GP0c | -0.274 | -0.149 |
| NOD | -2.309 | -2.023 |
| NZO | -3.448 | -3.664 |
| PWK | -3.919 | -3.066 |
| H37Rv_KO_CtpC | -0.968 | -1.607 |
| H37Rv_KO_CtpD | 0.47 | -0.196 |
| H37Rv_KO_Rv1272 | -0.313 | -0.643 |
| H37Rv_KO_SugABC | 1.336 | 0.527 |
| H37Rv_KO_MbtN | 1.129 | 0.485 |
| Trans05 | 0.035 | -0.73 |
| macrophage_unactivated | 1.174 | 0.786 |
| IL1 | -1.243 | -0.653 |
| Rapamycin | -1.139 | -0.325 |
| Tcell | 0.896 | -0.228 |
| GMCSF | 0.958 | 0.911 |
| IFNab | 0.952 | 1.394 |
| IFNg | 0.219 | 0.219 |
| IFNg_GMCSF1 | 0.113 | 0.408 |
| Rv1432_day32 | -3.313 | -2.588 |
| Rv1565c_day32 | -3.3 | -3.349 |
| secA2_input | -0.498 | 0.348 |
| delta_Rv3594 | -0.268 | -0.257 |
| delta_Rv3717 | -0.518 | -0.045 |
| delta_Rv3811 | 0.18 | 0.152 |
| delta_Rv0954 | -0.435 | 0.152 |
| PonA1 | -3.519 | -1.675 |
| EccD1_KO | -0.52 | -0.132 |
| EspI_KO | -0.71 | -0.188 |
| PE35_KO | 0.047 | -0.155 |
| PPE68_KO | 0.051 | -0.211 |
| glycerol2 | 0.3 | 0.052 |
| lignocerate | 0.146 | -0.222 |
| oleate | 0.157 | -0.352 |
| phosphatidylcholine | 0.053 | -0.286 |
| acetate | 0.048 | -0.032 |
| glucAc | 0.843 | -0.02 |
| Rv0950ko | 0.597 | -0.096 |
| Rv1096ko | 0.483 | 1.028 |
| Rv3684ko | 0.111 | 0.403 |
| delta_otsA_trehalose | -0.25 | 0.119 |