Top 10 genes with highest correlation to Rv0086/hycQ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0301/vapC2 | (cc=0.4779) | info on Rv0301/vapC2 |
| Rv0478/deoC | (cc=0.4737) | info on Rv0478/deoC |
| Rv2211c/gcvT | (cc=0.4671) | info on Rv2211c/gcvT |
| Rv1933c/fadE18 | (cc=0.4588) | info on Rv1933c/fadE18 |
| Rv2510c/- | (cc=0.4569) | info on Rv2510c/- |
| Rv0161/- | (cc=0.4453) | info on Rv0161/- |
| Rv2833c/ugpB | (cc=0.4347) | info on Rv2833c/ugpB |
| Rv1743/pknE | (cc=0.4318) | info on Rv1743/pknE |
| Rv3831/- | (cc=0.4233) | info on Rv3831/- |
| Rv1207/folP2 | (cc=0.4214) | info on Rv1207/folP2 |
Correlation of Rv0086/hycQ with Rv2211c/gcvT
Normalized LFCs for Rv0086/hycQ:
(description and provenance of datasets)
| Rv0086/hycQ | Rv2211c/gcvT | |
| Fe_supp_jason_reseq | 0.128 | -1.047 |
| low_pH_jason_reseq | -1.409 | -1.318 |
| NO_jason_reseq | -1.289 | -1.436 |
| B6_jason_reseq | -0.381 | -1.028 |
| MHCII_jason_reseq | -0.143 | -0.905 |
| Isoniazid02 | 0.902 | -0.194 |
| Rifampicin4 | 0.187 | -0.36 |
| Ethambutol3 | 1.082 | -0.22 |
| Meropenem3 | 0.443 | -0.335 |
| Vancomycin16 | 0.093 | -0.608 |
| Rv2680_day32 | 2.467 | 0.0 |
| H37Rv_KO_MarP | 0.545 | -0.33 |
| hypoxia_3wks | 0.817 | 1.005 |
| hypoxia_6wks | 1.393 | 0.758 |
| glycerol | -0.563 | 0.0 |
| cholesterol | -0.033 | -0.145 |
| AJ | -1.171 | 0.0 |
| Bibs02 | 0.229 | 0.717 |
| Bibs02c | -0.246 | -0.209 |
| BL6 | 0.107 | 0.218 |
| BL6a | 0.607 | 1.131 |
| BXD01 | 0.986 | 1.004 |
| BXD010 | 1.309 | 0.0 |
| BXD011 | 1.415 | 0.982 |
| BXD03 | 0.602 | 0.844 |
| BXD04 | 0.587 | 1.061 |
| BXD05 | 1.004 | 2.185 |
| BXD06 | 0.317 | 1.029 |
| BXD07 | 1.191 | 0.936 |
| BXD08 | 0.79 | 0.963 |
| BXD09 | 0.744 | 1.318 |
| CAST | -0.105 | 0.581 |
| CCcont | 0.849 | 0.585 |
| DS01 | -0.053 | 0.0 |
| DS02 | 0.592 | -0.217 |
| DS04 | 0.084 | -0.194 |
| DS0c | 1.059 | 0.987 |
| GP01 | 1.148 | 0.0 |
| GP02 | -0.621 | 0.0 |
| GP0c | 0.502 | 0.421 |
| NOD | 0.192 | 0.727 |
| NZO | -1.156 | -0.199 |
| PWK | -1.137 | 0.179 |
| H37Rv_KO_CtpC | 0.035 | 2.059 |
| H37Rv_KO_CtpD | 0.583 | -0.127 |
| H37Rv_KO_Rv1272 | -0.131 | -0.141 |
| H37Rv_KO_SugABC | -1.33 | -0.099 |
| H37Rv_KO_MbtN | -1.23 | 0.094 |
| Trans05 | 1.864 | -0.131 |
| macrophage_unactivated | 0.0 | 0.0 |
| IL1 | 1.32 | 0.905 |
| Rapamycin | 1.274 | 0.718 |
| Tcell | 0.89 | 0.521 |
| GMCSF | 0.766 | 0.422 |
| IFNab | 0.46 | 0.707 |
| IFNg | 0.307 | 0.815 |
| IFNg_GMCSF1 | 0.751 | 0.0 |
| Rv1432_day32 | -0.568 | 0.0 |
| Rv1565c_day32 | 0.142 | 0.0 |
| secA2_input | 1.044 | 0.504 |
| delta_Rv3594 | -1.037 | -0.358 |
| delta_Rv3717 | -0.853 | -0.294 |
| delta_Rv3811 | -0.488 | -0.226 |
| delta_Rv0954 | -0.536 | -0.536 |
| PonA1 | -0.825 | -0.594 |
| EccD1_KO | 0.973 | -0.329 |
| EspI_KO | 0.844 | 0.973 |
| PE35_KO | 0.0 | 0.0 |
| PPE68_KO | 0.0 | -0.32 |
| glycerol2 | -0.297 | 0.062 |
| lignocerate | 0.134 | -0.74 |
| oleate | -0.468 | 0.457 |
| phosphatidylcholine | -0.244 | 0.293 |
| acetate | 0.106 | -1.011 |
| glucAc | -0.452 | -1.233 |
| Rv0950ko | -0.292 | -0.38 |
| Rv1096ko | 1.007 | 0.67 |
| Rv3684ko | 0.845 | 1.055 |
| delta_otsA_trehalose | -0.459 | 0.564 |