Top 10 genes with highest correlation to Rv0086/hycQ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0301/vapC2 | (cc=0.4779) | info on Rv0301/vapC2 |
| Rv0478/deoC | (cc=0.4737) | info on Rv0478/deoC |
| Rv2211c/gcvT | (cc=0.4671) | info on Rv2211c/gcvT |
| Rv1933c/fadE18 | (cc=0.4588) | info on Rv1933c/fadE18 |
| Rv2510c/- | (cc=0.4569) | info on Rv2510c/- |
| Rv0161/- | (cc=0.4453) | info on Rv0161/- |
| Rv2833c/ugpB | (cc=0.4347) | info on Rv2833c/ugpB |
| Rv1743/pknE | (cc=0.4318) | info on Rv1743/pknE |
| Rv3831/- | (cc=0.4233) | info on Rv3831/- |
| Rv1207/folP2 | (cc=0.4214) | info on Rv1207/folP2 |
Correlation of Rv0086/hycQ with Rv1207/folP2
Normalized LFCs for Rv0086/hycQ:
(description and provenance of datasets)
| Rv0086/hycQ | Rv1207/folP2 | |
| Fe_supp_jason_reseq | 0.128 | -1.651 |
| low_pH_jason_reseq | -1.409 | -0.415 |
| NO_jason_reseq | -1.289 | -2.83 |
| B6_jason_reseq | -0.381 | -0.964 |
| MHCII_jason_reseq | -0.143 | -1.368 |
| Isoniazid02 | 0.902 | 0.118 |
| Rifampicin4 | 0.187 | 0.772 |
| Ethambutol3 | 1.082 | 2.741 |
| Meropenem3 | 0.443 | 0.835 |
| Vancomycin16 | 0.093 | 0.456 |
| Rv2680_day32 | 2.467 | -0.228 |
| H37Rv_KO_MarP | 0.545 | 1.136 |
| hypoxia_3wks | 0.817 | -0.758 |
| hypoxia_6wks | 1.393 | -1.263 |
| glycerol | -0.563 | -1.097 |
| cholesterol | -0.033 | 1.186 |
| AJ | -1.171 | -1.153 |
| Bibs02 | 0.229 | 0.758 |
| Bibs02c | -0.246 | 0.476 |
| BL6 | 0.107 | 0.757 |
| BL6a | 0.607 | 0.664 |
| BXD01 | 0.986 | 0.296 |
| BXD010 | 1.309 | 2.245 |
| BXD011 | 1.415 | 2.472 |
| BXD03 | 0.602 | 1.603 |
| BXD04 | 0.587 | 0.964 |
| BXD05 | 1.004 | 1.861 |
| BXD06 | 0.317 | 0.527 |
| BXD07 | 1.191 | 0.923 |
| BXD08 | 0.79 | 1.339 |
| BXD09 | 0.744 | 1.095 |
| CAST | -0.105 | 0.0 |
| CCcont | 0.849 | 0.647 |
| DS01 | -0.053 | -0.968 |
| DS02 | 0.592 | 0.684 |
| DS04 | 0.084 | -0.358 |
| DS0c | 1.059 | -1.284 |
| GP01 | 1.148 | -0.118 |
| GP02 | -0.621 | -0.91 |
| GP0c | 0.502 | -0.197 |
| NOD | 0.192 | -1.22 |
| NZO | -1.156 | -1.503 |
| PWK | -1.137 | 0.698 |
| H37Rv_KO_CtpC | 0.035 | 0.406 |
| H37Rv_KO_CtpD | 0.583 | 0.684 |
| H37Rv_KO_Rv1272 | -0.131 | 0.557 |
| H37Rv_KO_SugABC | -1.33 | 1.301 |
| H37Rv_KO_MbtN | -1.23 | 0.234 |
| Trans05 | 1.864 | 1.035 |
| macrophage_unactivated | 0.0 | 0.051 |
| IL1 | 1.32 | 1.243 |
| Rapamycin | 1.274 | 0.368 |
| Tcell | 0.89 | 0.622 |
| GMCSF | 0.766 | -0.214 |
| IFNab | 0.46 | 0.78 |
| IFNg | 0.307 | -1.713 |
| IFNg_GMCSF1 | 0.751 | -1.175 |
| Rv1432_day32 | -0.568 | -1.172 |
| Rv1565c_day32 | 0.142 | -1.641 |
| secA2_input | 1.044 | -0.463 |
| delta_Rv3594 | -1.037 | -0.369 |
| delta_Rv3717 | -0.853 | -1.617 |
| delta_Rv3811 | -0.488 | -1.581 |
| delta_Rv0954 | -0.536 | -1.244 |
| PonA1 | -0.825 | -0.382 |
| EccD1_KO | 0.973 | 0.516 |
| EspI_KO | 0.844 | -0.22 |
| PE35_KO | 0.0 | -0.767 |
| PPE68_KO | 0.0 | -1.017 |
| glycerol2 | -0.297 | -0.687 |
| lignocerate | 0.134 | -0.82 |
| oleate | -0.468 | 0.723 |
| phosphatidylcholine | -0.244 | -0.179 |
| acetate | 0.106 | 0.08 |
| glucAc | -0.452 | -0.617 |
| Rv0950ko | -0.292 | -0.633 |
| Rv1096ko | 1.007 | -0.685 |
| Rv3684ko | 0.845 | 1.248 |
| delta_otsA_trehalose | -0.459 | -0.211 |