Top 10 genes with highest correlation to Rv0086/hycQ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0301/vapC2 | (cc=0.4779) | info on Rv0301/vapC2 |
| Rv0478/deoC | (cc=0.4737) | info on Rv0478/deoC |
| Rv2211c/gcvT | (cc=0.4671) | info on Rv2211c/gcvT |
| Rv1933c/fadE18 | (cc=0.4588) | info on Rv1933c/fadE18 |
| Rv2510c/- | (cc=0.4569) | info on Rv2510c/- |
| Rv0161/- | (cc=0.4453) | info on Rv0161/- |
| Rv2833c/ugpB | (cc=0.4347) | info on Rv2833c/ugpB |
| Rv1743/pknE | (cc=0.4318) | info on Rv1743/pknE |
| Rv3831/- | (cc=0.4233) | info on Rv3831/- |
| Rv1207/folP2 | (cc=0.4214) | info on Rv1207/folP2 |
Correlation of Rv0086/hycQ with Rv0478/deoC
Normalized LFCs for Rv0086/hycQ:
(description and provenance of datasets)
| Rv0086/hycQ | Rv0478/deoC | |
| Fe_supp_jason_reseq | 0.128 | 0.15 |
| low_pH_jason_reseq | -1.409 | -0.731 |
| NO_jason_reseq | -1.289 | -2.142 |
| B6_jason_reseq | -0.381 | 1.559 |
| MHCII_jason_reseq | -0.143 | -0.517 |
| Isoniazid02 | 0.902 | 3.194 |
| Rifampicin4 | 0.187 | 0.964 |
| Ethambutol3 | 1.082 | 3.822 |
| Meropenem3 | 0.443 | -0.371 |
| Vancomycin16 | 0.093 | -0.669 |
| Rv2680_day32 | 2.467 | 0.062 |
| H37Rv_KO_MarP | 0.545 | 0.535 |
| hypoxia_3wks | 0.817 | -0.447 |
| hypoxia_6wks | 1.393 | 0.246 |
| glycerol | -0.563 | 0.641 |
| cholesterol | -0.033 | 0.423 |
| AJ | -1.171 | -0.75 |
| Bibs02 | 0.229 | -0.935 |
| Bibs02c | -0.246 | -0.629 |
| BL6 | 0.107 | 1.041 |
| BL6a | 0.607 | 0.99 |
| BXD01 | 0.986 | 1.893 |
| BXD010 | 1.309 | 1.964 |
| BXD011 | 1.415 | 1.974 |
| BXD03 | 0.602 | 1.121 |
| BXD04 | 0.587 | 1.2 |
| BXD05 | 1.004 | 1.063 |
| BXD06 | 0.317 | 1.782 |
| BXD07 | 1.191 | 1.264 |
| BXD08 | 0.79 | 2.159 |
| BXD09 | 0.744 | 1.298 |
| CAST | -0.105 | -1.555 |
| CCcont | 0.849 | 0.807 |
| DS01 | -0.053 | 0.116 |
| DS02 | 0.592 | -1.468 |
| DS04 | 0.084 | -0.888 |
| DS0c | 1.059 | 1.106 |
| GP01 | 1.148 | 0.041 |
| GP02 | -0.621 | 0.398 |
| GP0c | 0.502 | 0.958 |
| NOD | 0.192 | -2.278 |
| NZO | -1.156 | -0.812 |
| PWK | -1.137 | -2.269 |
| H37Rv_KO_CtpC | 0.035 | 0.76 |
| H37Rv_KO_CtpD | 0.583 | 1.284 |
| H37Rv_KO_Rv1272 | -0.131 | 0.047 |
| H37Rv_KO_SugABC | -1.33 | -2.057 |
| H37Rv_KO_MbtN | -1.23 | -1.459 |
| Trans05 | 1.864 | -0.947 |
| macrophage_unactivated | 0.0 | 0.3 |
| IL1 | 1.32 | -0.836 |
| Rapamycin | 1.274 | 0.292 |
| Tcell | 0.89 | -0.567 |
| GMCSF | 0.766 | 0.219 |
| IFNab | 0.46 | 0.81 |
| IFNg | 0.307 | 1.395 |
| IFNg_GMCSF1 | 0.751 | 0.123 |
| Rv1432_day32 | -0.568 | 0.675 |
| Rv1565c_day32 | 0.142 | -0.191 |
| secA2_input | 1.044 | 1.068 |
| delta_Rv3594 | -1.037 | -0.505 |
| delta_Rv3717 | -0.853 | -0.281 |
| delta_Rv3811 | -0.488 | -2.55 |
| delta_Rv0954 | -0.536 | -1.313 |
| PonA1 | -0.825 | -3.114 |
| EccD1_KO | 0.973 | -1.059 |
| EspI_KO | 0.844 | -2.647 |
| PE35_KO | 0.0 | -0.758 |
| PPE68_KO | 0.0 | -1.533 |
| glycerol2 | -0.297 | -0.796 |
| lignocerate | 0.134 | 0.062 |
| oleate | -0.468 | -0.532 |
| phosphatidylcholine | -0.244 | -0.724 |
| acetate | 0.106 | 0.697 |
| glucAc | -0.452 | 0.321 |
| Rv0950ko | -0.292 | 0.353 |
| Rv1096ko | 1.007 | 2.147 |
| Rv3684ko | 0.845 | 0.213 |
| delta_otsA_trehalose | -0.459 | -1.884 |