Top 10 genes with highest correlation to Rv0051/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1209/- | (cc=0.651) | info on Rv1209/- |
| Rv1072/- | (cc=0.6321) | info on Rv1072/- |
| Rv0563/htpX | (cc=0.588) | info on Rv0563/htpX |
| Rv3584/lpqE | (cc=0.5822) | info on Rv3584/lpqE |
| Rv3214/gpm2 | (cc=0.5717) | info on Rv3214/gpm2 |
| Rv3419c/gcp | (cc=0.5536) | info on Rv3419c/gcp |
| Rv3689/- | (cc=0.5434) | info on Rv3689/- |
| Rv3842c/glpQ1 | (cc=0.541) | info on Rv3842c/glpQ1 |
| Rv3835/- | (cc=0.5373) | info on Rv3835/- |
| Rv1100/- | (cc=0.5318) | info on Rv1100/- |
Correlation of Rv0051/- with Rv3835/-
Normalized LFCs for Rv0051/-:
(description and provenance of datasets)
| Rv0051/- | Rv3835/- | |
| Fe_supp_jason_reseq | 0.14 | 0.175 |
| low_pH_jason_reseq | 0.149 | -1.077 |
| NO_jason_reseq | 0.0 | -0.512 |
| B6_jason_reseq | 1.307 | -1.291 |
| MHCII_jason_reseq | -0.538 | -0.659 |
| Isoniazid02 | -1.566 | 0.425 |
| Rifampicin4 | -0.422 | 1.107 |
| Ethambutol3 | 4.091 | 2.612 |
| Meropenem3 | 1.678 | 0.942 |
| Vancomycin16 | -0.255 | 0.0 |
| Rv2680_day32 | -0.864 | -1.024 |
| H37Rv_KO_MarP | -1.266 | -1.139 |
| hypoxia_3wks | 0.187 | -0.255 |
| hypoxia_6wks | 0.121 | 0.566 |
| glycerol | 0.124 | -0.222 |
| cholesterol | -0.162 | 0.773 |
| AJ | -0.049 | -0.983 |
| Bibs02 | -0.531 | -0.31 |
| Bibs02c | -1.285 | -0.887 |
| BL6 | 1.125 | 1.392 |
| BL6a | 0.703 | 0.228 |
| BXD01 | 1.147 | 1.394 |
| BXD010 | 1.062 | 1.425 |
| BXD011 | 0.81 | 1.952 |
| BXD03 | 1.433 | 2.034 |
| BXD04 | 1.971 | 1.954 |
| BXD05 | 1.161 | 0.852 |
| BXD06 | 1.435 | 1.85 |
| BXD07 | 1.358 | 1.614 |
| BXD08 | 1.226 | 1.519 |
| BXD09 | 0.715 | 1.224 |
| CAST | 0.868 | 0.439 |
| CCcont | 0.759 | 1.345 |
| DS01 | -1.406 | -0.45 |
| DS02 | -0.788 | 1.271 |
| DS04 | -0.791 | -0.034 |
| DS0c | -0.541 | -0.506 |
| GP01 | 0.651 | 0.43 |
| GP02 | -0.612 | 0.617 |
| GP0c | -0.027 | 0.267 |
| NOD | 1.067 | 0.428 |
| NZO | 0.536 | 0.493 |
| PWK | 1.38 | 0.665 |
| H37Rv_KO_CtpC | 0.526 | 0.467 |
| H37Rv_KO_CtpD | -1.495 | 0.26 |
| H37Rv_KO_Rv1272 | -0.763 | -0.102 |
| H37Rv_KO_SugABC | -0.054 | 2.433 |
| H37Rv_KO_MbtN | 0.104 | 2.451 |
| Trans05 | 0.251 | 1.423 |
| macrophage_unactivated | -0.846 | 0.066 |
| IL1 | 0.0 | -0.03 |
| Rapamycin | -0.675 | -0.924 |
| Tcell | -0.297 | -1.61 |
| GMCSF | -0.378 | 0.267 |
| IFNab | 0.16 | 1.134 |
| IFNg | -0.323 | 0.569 |
| IFNg_GMCSF1 | -0.333 | 0.971 |
| Rv1432_day32 | -0.117 | -0.541 |
| Rv1565c_day32 | -0.782 | -1.579 |
| secA2_input | 0.476 | 0.571 |
| delta_Rv3594 | -0.95 | 0.086 |
| delta_Rv3717 | -0.482 | 0.964 |
| delta_Rv3811 | -0.791 | 0.807 |
| delta_Rv0954 | -0.876 | 0.234 |
| PonA1 | 0.703 | -0.398 |
| EccD1_KO | -0.71 | -0.109 |
| EspI_KO | -0.787 | -0.068 |
| PE35_KO | -1.272 | -1.155 |
| PPE68_KO | -0.246 | -0.634 |
| glycerol2 | -0.206 | 0.737 |
| lignocerate | -0.242 | 0.377 |
| oleate | 0.033 | 0.081 |
| phosphatidylcholine | -0.279 | -0.353 |
| acetate | -0.181 | 1.127 |
| glucAc | -0.099 | 0.91 |
| Rv0950ko | 0.314 | -0.202 |
| Rv1096ko | 1.764 | 0.431 |
| Rv3684ko | 1.346 | 0.891 |
| delta_otsA_trehalose | 0.503 | -0.228 |