Top 10 genes with highest correlation to Rv0051/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1209/- | (cc=0.651) | info on Rv1209/- |
| Rv1072/- | (cc=0.6321) | info on Rv1072/- |
| Rv0563/htpX | (cc=0.588) | info on Rv0563/htpX |
| Rv3584/lpqE | (cc=0.5822) | info on Rv3584/lpqE |
| Rv3214/gpm2 | (cc=0.5717) | info on Rv3214/gpm2 |
| Rv3419c/gcp | (cc=0.5536) | info on Rv3419c/gcp |
| Rv3689/- | (cc=0.5434) | info on Rv3689/- |
| Rv3842c/glpQ1 | (cc=0.541) | info on Rv3842c/glpQ1 |
| Rv3835/- | (cc=0.5373) | info on Rv3835/- |
| Rv1100/- | (cc=0.5318) | info on Rv1100/- |
Correlation of Rv0051/- with Rv3214/gpm2
Normalized LFCs for Rv0051/-:
(description and provenance of datasets)
| Rv0051/- | Rv3214/gpm2 | |
| Fe_supp_jason_reseq | 0.14 | 0.867 |
| low_pH_jason_reseq | 0.149 | 0.979 |
| NO_jason_reseq | 0.0 | -1.137 |
| B6_jason_reseq | 1.307 | 0.483 |
| MHCII_jason_reseq | -0.538 | -0.612 |
| Isoniazid02 | -1.566 | -1.104 |
| Rifampicin4 | -0.422 | -0.374 |
| Ethambutol3 | 4.091 | 4.243 |
| Meropenem3 | 1.678 | -0.04 |
| Vancomycin16 | -0.255 | -0.088 |
| Rv2680_day32 | -0.864 | 0.82 |
| H37Rv_KO_MarP | -1.266 | 0.246 |
| hypoxia_3wks | 0.187 | -1.878 |
| hypoxia_6wks | 0.121 | -0.311 |
| glycerol | 0.124 | -1.005 |
| cholesterol | -0.162 | 0.435 |
| AJ | -0.049 | -0.151 |
| Bibs02 | -0.531 | -2.015 |
| Bibs02c | -1.285 | -0.608 |
| BL6 | 1.125 | 0.42 |
| BL6a | 0.703 | 0.776 |
| BXD01 | 1.147 | 2.616 |
| BXD010 | 1.062 | 1.134 |
| BXD011 | 0.81 | 1.778 |
| BXD03 | 1.433 | 1.295 |
| BXD04 | 1.971 | 2.487 |
| BXD05 | 1.161 | 1.997 |
| BXD06 | 1.435 | 2.521 |
| BXD07 | 1.358 | 1.939 |
| BXD08 | 1.226 | 2.866 |
| BXD09 | 0.715 | 1.944 |
| CAST | 0.868 | 0.976 |
| CCcont | 0.759 | 0.754 |
| DS01 | -1.406 | -0.838 |
| DS02 | -0.788 | -1.442 |
| DS04 | -0.791 | -1.739 |
| DS0c | -0.541 | -0.456 |
| GP01 | 0.651 | -0.207 |
| GP02 | -0.612 | -0.686 |
| GP0c | -0.027 | 0.742 |
| NOD | 1.067 | 0.07 |
| NZO | 0.536 | 1.121 |
| PWK | 1.38 | -0.652 |
| H37Rv_KO_CtpC | 0.526 | -1.077 |
| H37Rv_KO_CtpD | -1.495 | -0.04 |
| H37Rv_KO_Rv1272 | -0.763 | 0.953 |
| H37Rv_KO_SugABC | -0.054 | 0.399 |
| H37Rv_KO_MbtN | 0.104 | -0.196 |
| Trans05 | 0.251 | 1.705 |
| macrophage_unactivated | -0.846 | -0.281 |
| IL1 | 0.0 | -1.299 |
| Rapamycin | -0.675 | -1.418 |
| Tcell | -0.297 | 0.772 |
| GMCSF | -0.378 | -1.347 |
| IFNab | 0.16 | -1.185 |
| IFNg | -0.323 | 0.307 |
| IFNg_GMCSF1 | -0.333 | -1.376 |
| Rv1432_day32 | -0.117 | 0.0 |
| Rv1565c_day32 | -0.782 | 0.044 |
| secA2_input | 0.476 | -3.572 |
| delta_Rv3594 | -0.95 | 0.746 |
| delta_Rv3717 | -0.482 | 1.616 |
| delta_Rv3811 | -0.791 | 1.666 |
| delta_Rv0954 | -0.876 | -1.213 |
| PonA1 | 0.703 | -0.386 |
| EccD1_KO | -0.71 | -1.845 |
| EspI_KO | -0.787 | -1.403 |
| PE35_KO | -1.272 | -2.824 |
| PPE68_KO | -0.246 | -1.872 |
| glycerol2 | -0.206 | -1.033 |
| lignocerate | -0.242 | -1.038 |
| oleate | 0.033 | -1.65 |
| phosphatidylcholine | -0.279 | -1.63 |
| acetate | -0.181 | 1.368 |
| glucAc | -0.099 | 0.864 |
| Rv0950ko | 0.314 | -0.332 |
| Rv1096ko | 1.764 | 0.651 |
| Rv3684ko | 1.346 | 1.916 |
| delta_otsA_trehalose | 0.503 | 0.466 |