Top 10 genes with highest correlation to Rv0051/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1209/- | (cc=0.651) | info on Rv1209/- |
| Rv1072/- | (cc=0.6321) | info on Rv1072/- |
| Rv0563/htpX | (cc=0.588) | info on Rv0563/htpX |
| Rv3584/lpqE | (cc=0.5822) | info on Rv3584/lpqE |
| Rv3214/gpm2 | (cc=0.5717) | info on Rv3214/gpm2 |
| Rv3419c/gcp | (cc=0.5536) | info on Rv3419c/gcp |
| Rv3689/- | (cc=0.5434) | info on Rv3689/- |
| Rv3842c/glpQ1 | (cc=0.541) | info on Rv3842c/glpQ1 |
| Rv3835/- | (cc=0.5373) | info on Rv3835/- |
| Rv1100/- | (cc=0.5318) | info on Rv1100/- |
Correlation of Rv0051/- with Rv3689/-
Normalized LFCs for Rv0051/-:
(description and provenance of datasets)
| Rv0051/- | Rv3689/- | |
| Fe_supp_jason_reseq | 0.14 | -0.388 |
| low_pH_jason_reseq | 0.149 | -1.681 |
| NO_jason_reseq | 0.0 | 0.105 |
| B6_jason_reseq | 1.307 | 0.499 |
| MHCII_jason_reseq | -0.538 | -0.62 |
| Isoniazid02 | -1.566 | -1.107 |
| Rifampicin4 | -0.422 | 0.495 |
| Ethambutol3 | 4.091 | 0.951 |
| Meropenem3 | 1.678 | -0.364 |
| Vancomycin16 | -0.255 | -0.058 |
| Rv2680_day32 | -0.864 | -0.811 |
| H37Rv_KO_MarP | -1.266 | -1.24 |
| hypoxia_3wks | 0.187 | 0.638 |
| hypoxia_6wks | 0.121 | 0.739 |
| glycerol | 0.124 | -0.295 |
| cholesterol | -0.162 | -0.2 |
| AJ | -0.049 | 0.576 |
| Bibs02 | -0.531 | -0.311 |
| Bibs02c | -1.285 | -0.073 |
| BL6 | 1.125 | 0.728 |
| BL6a | 0.703 | 0.844 |
| BXD01 | 1.147 | 1.055 |
| BXD010 | 1.062 | 0.8 |
| BXD011 | 0.81 | 0.852 |
| BXD03 | 1.433 | 1.454 |
| BXD04 | 1.971 | 1.548 |
| BXD05 | 1.161 | 1.047 |
| BXD06 | 1.435 | 0.962 |
| BXD07 | 1.358 | 1.026 |
| BXD08 | 1.226 | 1.004 |
| BXD09 | 0.715 | 0.486 |
| CAST | 0.868 | 1.677 |
| CCcont | 0.759 | 0.27 |
| DS01 | -1.406 | -0.202 |
| DS02 | -0.788 | 0.044 |
| DS04 | -0.791 | 0.225 |
| DS0c | -0.541 | -0.091 |
| GP01 | 0.651 | 0.821 |
| GP02 | -0.612 | 0.096 |
| GP0c | -0.027 | 0.85 |
| NOD | 1.067 | 0.957 |
| NZO | 0.536 | 1.16 |
| PWK | 1.38 | 2.364 |
| H37Rv_KO_CtpC | 0.526 | 0.806 |
| H37Rv_KO_CtpD | -1.495 | 0.981 |
| H37Rv_KO_Rv1272 | -0.763 | 0.967 |
| H37Rv_KO_SugABC | -0.054 | 1.067 |
| H37Rv_KO_MbtN | 0.104 | 1.472 |
| Trans05 | 0.251 | 0.496 |
| macrophage_unactivated | -0.846 | 0.079 |
| IL1 | 0.0 | -0.374 |
| Rapamycin | -0.675 | -0.997 |
| Tcell | -0.297 | 0.508 |
| GMCSF | -0.378 | 0.132 |
| IFNab | 0.16 | 0.206 |
| IFNg | -0.323 | 0.722 |
| IFNg_GMCSF1 | -0.333 | 0.452 |
| Rv1432_day32 | -0.117 | 1.172 |
| Rv1565c_day32 | -0.782 | -0.482 |
| secA2_input | 0.476 | -0.488 |
| delta_Rv3594 | -0.95 | -0.58 |
| delta_Rv3717 | -0.482 | -0.205 |
| delta_Rv3811 | -0.791 | -0.21 |
| delta_Rv0954 | -0.876 | -0.979 |
| PonA1 | 0.703 | -0.099 |
| EccD1_KO | -0.71 | 0.122 |
| EspI_KO | -0.787 | -0.217 |
| PE35_KO | -1.272 | 0.295 |
| PPE68_KO | -0.246 | 0.208 |
| glycerol2 | -0.206 | 0.27 |
| lignocerate | -0.242 | -0.029 |
| oleate | 0.033 | 0.717 |
| phosphatidylcholine | -0.279 | -0.052 |
| acetate | -0.181 | 0.284 |
| glucAc | -0.099 | 0.188 |
| Rv0950ko | 0.314 | 0.202 |
| Rv1096ko | 1.764 | 0.85 |
| Rv3684ko | 1.346 | 0.799 |
| delta_otsA_trehalose | 0.503 | -0.482 |