Top 10 genes with highest correlation to Rv0051/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1209/- | (cc=0.651) | info on Rv1209/- |
| Rv1072/- | (cc=0.6321) | info on Rv1072/- |
| Rv0563/htpX | (cc=0.588) | info on Rv0563/htpX |
| Rv3584/lpqE | (cc=0.5822) | info on Rv3584/lpqE |
| Rv3214/gpm2 | (cc=0.5717) | info on Rv3214/gpm2 |
| Rv3419c/gcp | (cc=0.5536) | info on Rv3419c/gcp |
| Rv3689/- | (cc=0.5434) | info on Rv3689/- |
| Rv3842c/glpQ1 | (cc=0.541) | info on Rv3842c/glpQ1 |
| Rv3835/- | (cc=0.5373) | info on Rv3835/- |
| Rv1100/- | (cc=0.5318) | info on Rv1100/- |
Correlation of Rv0051/- with Rv0563/htpX
Normalized LFCs for Rv0051/-:
(description and provenance of datasets)
| Rv0051/- | Rv0563/htpX | |
| Fe_supp_jason_reseq | 0.14 | 1.76 |
| low_pH_jason_reseq | 0.149 | 3.803 |
| NO_jason_reseq | 0.0 | 0.845 |
| B6_jason_reseq | 1.307 | 1.318 |
| MHCII_jason_reseq | -0.538 | -1.332 |
| Isoniazid02 | -1.566 | -2.187 |
| Rifampicin4 | -0.422 | -2.342 |
| Ethambutol3 | 4.091 | 1.796 |
| Meropenem3 | 1.678 | 0.034 |
| Vancomycin16 | -0.255 | -2.435 |
| Rv2680_day32 | -0.864 | 0.241 |
| H37Rv_KO_MarP | -1.266 | -3.429 |
| hypoxia_3wks | 0.187 | 1.236 |
| hypoxia_6wks | 0.121 | -0.672 |
| glycerol | 0.124 | -0.579 |
| cholesterol | -0.162 | -0.773 |
| AJ | -0.049 | 1.479 |
| Bibs02 | -0.531 | 0.216 |
| Bibs02c | -1.285 | 0.399 |
| BL6 | 1.125 | 1.054 |
| BL6a | 0.703 | 1.263 |
| BXD01 | 1.147 | 1.681 |
| BXD010 | 1.062 | 1.54 |
| BXD011 | 0.81 | 0.722 |
| BXD03 | 1.433 | 2.623 |
| BXD04 | 1.971 | 2.885 |
| BXD05 | 1.161 | 1.003 |
| BXD06 | 1.435 | 1.906 |
| BXD07 | 1.358 | 2.27 |
| BXD08 | 1.226 | 2.084 |
| BXD09 | 0.715 | 1.131 |
| CAST | 0.868 | 1.94 |
| CCcont | 0.759 | 1.835 |
| DS01 | -1.406 | 0.76 |
| DS02 | -0.788 | -1.161 |
| DS04 | -0.791 | -0.259 |
| DS0c | -0.541 | 0.413 |
| GP01 | 0.651 | 0.318 |
| GP02 | -0.612 | -0.638 |
| GP0c | -0.027 | 0.335 |
| NOD | 1.067 | 3.414 |
| NZO | 0.536 | 1.527 |
| PWK | 1.38 | 3.844 |
| H37Rv_KO_CtpC | 0.526 | 3.597 |
| H37Rv_KO_CtpD | -1.495 | -0.363 |
| H37Rv_KO_Rv1272 | -0.763 | -0.329 |
| H37Rv_KO_SugABC | -0.054 | 0.797 |
| H37Rv_KO_MbtN | 0.104 | 0.196 |
| Trans05 | 0.251 | 2.303 |
| macrophage_unactivated | -0.846 | 0.48 |
| IL1 | 0.0 | -0.397 |
| Rapamycin | -0.675 | -1.114 |
| Tcell | -0.297 | 1.193 |
| GMCSF | -0.378 | 0.834 |
| IFNab | 0.16 | 1.466 |
| IFNg | -0.323 | -0.754 |
| IFNg_GMCSF1 | -0.333 | 0.386 |
| Rv1432_day32 | -0.117 | 0.763 |
| Rv1565c_day32 | -0.782 | -0.924 |
| secA2_input | 0.476 | 1.371 |
| delta_Rv3594 | -0.95 | -1.634 |
| delta_Rv3717 | -0.482 | -3.374 |
| delta_Rv3811 | -0.791 | -1.28 |
| delta_Rv0954 | -0.876 | -3.76 |
| PonA1 | 0.703 | -1.401 |
| EccD1_KO | -0.71 | 2.125 |
| EspI_KO | -0.787 | 1.882 |
| PE35_KO | -1.272 | -0.187 |
| PPE68_KO | -0.246 | 1.123 |
| glycerol2 | -0.206 | 0.369 |
| lignocerate | -0.242 | 0.168 |
| oleate | 0.033 | 0.196 |
| phosphatidylcholine | -0.279 | 0.368 |
| acetate | -0.181 | 1.539 |
| glucAc | -0.099 | 0.0 |
| Rv0950ko | 0.314 | 0.0 |
| Rv1096ko | 1.764 | 3.29 |
| Rv3684ko | 1.346 | 2.613 |
| delta_otsA_trehalose | 0.503 | 2.344 |