Top 10 genes with highest correlation to Rv0051/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1209/- | (cc=0.651) | info on Rv1209/- |
| Rv1072/- | (cc=0.6321) | info on Rv1072/- |
| Rv0563/htpX | (cc=0.588) | info on Rv0563/htpX |
| Rv3584/lpqE | (cc=0.5822) | info on Rv3584/lpqE |
| Rv3214/gpm2 | (cc=0.5717) | info on Rv3214/gpm2 |
| Rv3419c/gcp | (cc=0.5536) | info on Rv3419c/gcp |
| Rv3689/- | (cc=0.5434) | info on Rv3689/- |
| Rv3842c/glpQ1 | (cc=0.541) | info on Rv3842c/glpQ1 |
| Rv3835/- | (cc=0.5373) | info on Rv3835/- |
| Rv1100/- | (cc=0.5318) | info on Rv1100/- |
Correlation of Rv0051/- with Rv3584/lpqE
Normalized LFCs for Rv0051/-:
(description and provenance of datasets)
| Rv0051/- | Rv3584/lpqE | |
| Fe_supp_jason_reseq | 0.14 | 0.696 |
| low_pH_jason_reseq | 0.149 | 1.337 |
| NO_jason_reseq | 0.0 | -1.775 |
| B6_jason_reseq | 1.307 | -1.071 |
| MHCII_jason_reseq | -0.538 | -1.855 |
| Isoniazid02 | -1.566 | 0.745 |
| Rifampicin4 | -0.422 | 1.032 |
| Ethambutol3 | 4.091 | 2.813 |
| Meropenem3 | 1.678 | 3.481 |
| Vancomycin16 | -0.255 | 0.117 |
| Rv2680_day32 | -0.864 | 0.223 |
| H37Rv_KO_MarP | -1.266 | -0.056 |
| hypoxia_3wks | 0.187 | -0.861 |
| hypoxia_6wks | 0.121 | -0.464 |
| glycerol | 0.124 | -2.035 |
| cholesterol | -0.162 | -0.775 |
| AJ | -0.049 | -0.977 |
| Bibs02 | -0.531 | -0.62 |
| Bibs02c | -1.285 | -2.166 |
| BL6 | 1.125 | 0.257 |
| BL6a | 0.703 | -0.095 |
| BXD01 | 1.147 | 0.783 |
| BXD010 | 1.062 | 0.645 |
| BXD011 | 0.81 | 1.338 |
| BXD03 | 1.433 | 0.837 |
| BXD04 | 1.971 | 1.091 |
| BXD05 | 1.161 | 1.053 |
| BXD06 | 1.435 | 1.089 |
| BXD07 | 1.358 | 0.952 |
| BXD08 | 1.226 | 1.162 |
| BXD09 | 0.715 | 0.73 |
| CAST | 0.868 | 1.054 |
| CCcont | 0.759 | -0.048 |
| DS01 | -1.406 | -0.994 |
| DS02 | -0.788 | -0.069 |
| DS04 | -0.791 | -0.672 |
| DS0c | -0.541 | -1.758 |
| GP01 | 0.651 | 1.018 |
| GP02 | -0.612 | 0.607 |
| GP0c | -0.027 | 0.306 |
| NOD | 1.067 | 0.801 |
| NZO | 0.536 | -0.764 |
| PWK | 1.38 | -0.708 |
| H37Rv_KO_CtpC | 0.526 | 0.537 |
| H37Rv_KO_CtpD | -1.495 | -2.359 |
| H37Rv_KO_Rv1272 | -0.763 | 0.315 |
| H37Rv_KO_SugABC | -0.054 | 0.997 |
| H37Rv_KO_MbtN | 0.104 | -0.32 |
| Trans05 | 0.251 | 0.531 |
| macrophage_unactivated | -0.846 | 0.271 |
| IL1 | 0.0 | -0.831 |
| Rapamycin | -0.675 | 0.617 |
| Tcell | -0.297 | 0.619 |
| GMCSF | -0.378 | -0.842 |
| IFNab | 0.16 | 0.115 |
| IFNg | -0.323 | 0.166 |
| IFNg_GMCSF1 | -0.333 | 0.581 |
| Rv1432_day32 | -0.117 | 0.258 |
| Rv1565c_day32 | -0.782 | 0.0 |
| secA2_input | 0.476 | 0.124 |
| delta_Rv3594 | -0.95 | -0.75 |
| delta_Rv3717 | -0.482 | -1.207 |
| delta_Rv3811 | -0.791 | -0.519 |
| delta_Rv0954 | -0.876 | -1.01 |
| PonA1 | 0.703 | 0.209 |
| EccD1_KO | -0.71 | -0.483 |
| EspI_KO | -0.787 | -0.85 |
| PE35_KO | -1.272 | -1.339 |
| PPE68_KO | -0.246 | -1.225 |
| glycerol2 | -0.206 | -0.755 |
| lignocerate | -0.242 | 0.051 |
| oleate | 0.033 | -0.441 |
| phosphatidylcholine | -0.279 | 0.048 |
| acetate | -0.181 | -0.332 |
| glucAc | -0.099 | -0.447 |
| Rv0950ko | 0.314 | -0.534 |
| Rv1096ko | 1.764 | 1.037 |
| Rv3684ko | 1.346 | -0.206 |
| delta_otsA_trehalose | 0.503 | 0.51 |