Top 10 genes with highest correlation to Rv3910/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0037c/- | (cc=0.5806) | info on Rv0037c/- |
| Rv3484/cpsA | (cc=0.5335) | info on Rv3484/cpsA |
| Rv1333/- | (cc=0.5267) | info on Rv1333/- |
| Rv1337/- | (cc=0.4882) | info on Rv1337/- |
| Rv1336/cysM | (cc=0.4857) | info on Rv1336/cysM |
| Rv3779/- | (cc=0.4839) | info on Rv3779/- |
| Rv2197c/- | (cc=0.4799) | info on Rv2197c/- |
| Rv1640c/lysX | (cc=0.4719) | info on Rv1640c/lysX |
| Rv1886c/fbpB | (cc=0.4717) | info on Rv1886c/fbpB |
| Rv1244/lpqZ | (cc=0.4515) | info on Rv1244/lpqZ |
Correlation of Rv3910/- with Rv1886c/fbpB
Normalized LFCs for Rv3910/-:
(description and provenance of datasets)
| Rv3910/- | Rv1886c/fbpB | |
| Fe_supp_jason_reseq | 1.358 | -0.499 |
| low_pH_jason_reseq | 0.333 | -0.581 |
| NO_jason_reseq | 0.0 | -0.202 |
| B6_jason_reseq | -0.256 | -0.563 |
| MHCII_jason_reseq | 0.519 | 0.038 |
| Isoniazid02 | -1.263 | 0.631 |
| Rifampicin4 | -1.329 | -1.882 |
| Ethambutol3 | -3.283 | 0.107 |
| Meropenem3 | -2.064 | -0.234 |
| Vancomycin16 | -1.541 | 0.093 |
| Rv2680_day32 | 1.157 | 0.745 |
| H37Rv_KO_MarP | 3.066 | 0.539 |
| hypoxia_3wks | 3.098 | 1.085 |
| hypoxia_6wks | 2.57 | 1.002 |
| glycerol | -1.865 | -0.184 |
| cholesterol | -0.497 | 0.668 |
| AJ | -2.143 | -0.331 |
| Bibs02 | -1.109 | 0.823 |
| Bibs02c | -1.32 | 0.778 |
| BL6 | -0.187 | 0.826 |
| BL6a | -1.462 | 0.848 |
| BXD01 | 0.088 | 0.159 |
| BXD010 | -0.151 | 0.251 |
| BXD011 | 0.733 | 0.144 |
| BXD03 | -1.078 | -0.171 |
| BXD04 | -0.035 | 0.13 |
| BXD05 | -0.657 | 0.305 |
| BXD06 | -0.484 | 0.216 |
| BXD07 | -0.805 | 0.309 |
| BXD08 | -0.31 | 0.355 |
| BXD09 | -0.596 | 0.148 |
| CAST | -2.743 | -0.873 |
| CCcont | 0.598 | 0.579 |
| DS01 | -3.027 | -0.033 |
| DS02 | -2.59 | -0.452 |
| DS04 | -1.432 | -0.226 |
| DS0c | -1.541 | 0.476 |
| GP01 | 0.874 | 1.114 |
| GP02 | -0.085 | 0.382 |
| GP0c | 1.642 | 1.009 |
| NOD | -2.312 | -0.792 |
| NZO | -1.91 | -0.065 |
| PWK | -2.252 | -1.02 |
| H37Rv_KO_CtpC | -0.59 | 0.815 |
| H37Rv_KO_CtpD | 0.166 | 1.066 |
| H37Rv_KO_Rv1272 | -0.484 | 0.965 |
| H37Rv_KO_SugABC | 0.765 | 0.578 |
| H37Rv_KO_MbtN | 1.653 | 0.647 |
| Trans05 | -0.217 | 0.315 |
| macrophage_unactivated | -0.994 | 0.48 |
| IL1 | -0.044 | 0.059 |
| Rapamycin | -0.046 | 0.166 |
| Tcell | 0.238 | 0.209 |
| GMCSF | -0.459 | -0.478 |
| IFNab | 0.856 | 0.221 |
| IFNg | -0.556 | -0.802 |
| IFNg_GMCSF1 | -1.046 | -1.059 |
| Rv1432_day32 | 0.0 | 0.589 |
| Rv1565c_day32 | 0.0 | 0.253 |
| secA2_input | -0.412 | -0.136 |
| delta_Rv3594 | 0.269 | 0.561 |
| delta_Rv3717 | 1.252 | 0.547 |
| delta_Rv3811 | 0.84 | 0.223 |
| delta_Rv0954 | 0.642 | 0.62 |
| PonA1 | -4.027 | -0.207 |
| EccD1_KO | -1.677 | -0.77 |
| EspI_KO | -1.68 | -0.682 |
| PE35_KO | -2.491 | -0.394 |
| PPE68_KO | -0.982 | -0.925 |
| glycerol2 | -1.006 | -0.581 |
| lignocerate | -1.118 | 0.084 |
| oleate | -1.154 | -0.359 |
| phosphatidylcholine | -1.361 | -1.455 |
| acetate | 0.389 | -0.19 |
| glucAc | -0.362 | -0.285 |
| Rv0950ko | 0.0 | -0.178 |
| Rv1096ko | -1.034 | -0.398 |
| Rv3684ko | 0.262 | -0.737 |
| delta_otsA_trehalose | 0.36 | -0.195 |