Top 10 genes with highest correlation to Rv3868/eccA1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1235/lpqY | (cc=0.7865) | info on Rv1235/lpqY |
| Rv1236/sugA | (cc=0.7757) | info on Rv1236/sugA |
| Rv0485/- | (cc=0.7564) | info on Rv0485/- |
| Rv1405c/- | (cc=0.7555) | info on Rv1405c/- |
| Rv1568/bioA | (cc=0.7453) | info on Rv1568/bioA |
| Rv0101/nrp | (cc=0.7444) | info on Rv0101/nrp |
| Rv1590/- | (cc=0.7394) | info on Rv1590/- |
| Rv1589/bioB | (cc=0.7362) | info on Rv1589/bioB |
| Rv3870/eccCa1 | (cc=0.7265) | info on Rv3870/eccCa1 |
| Rv3544c/fadE28 | (cc=0.7151) | info on Rv3544c/fadE28 |
Correlation of Rv3868/eccA1 with Rv1405c/-
Normalized LFCs for Rv3868/eccA1:
(description and provenance of datasets)
| Rv3868/eccA1 | Rv1405c/- | |
| Fe_supp_jason_reseq | -1.119 | 0.0 |
| low_pH_jason_reseq | -0.226 | -1.0 |
| NO_jason_reseq | -0.428 | 0.116 |
| B6_jason_reseq | -2.84 | -1.7 |
| MHCII_jason_reseq | -3.272 | -3.452 |
| Isoniazid02 | -0.314 | -0.09 |
| Rifampicin4 | 0.0 | -0.249 |
| Ethambutol3 | 0.492 | -0.154 |
| Meropenem3 | -0.272 | -0.404 |
| Vancomycin16 | -0.027 | 0.011 |
| Rv2680_day32 | -2.328 | -2.352 |
| H37Rv_KO_MarP | 0.158 | 0.388 |
| hypoxia_3wks | 0.666 | 0.199 |
| hypoxia_6wks | 0.852 | -0.14 |
| glycerol | -0.556 | -1.011 |
| cholesterol | 0.018 | -0.51 |
| AJ | -4.466 | -2.546 |
| Bibs02 | -1.574 | -2.874 |
| Bibs02c | -1.925 | -3.031 |
| BL6 | -1.983 | -0.849 |
| BL6a | -1.949 | -2.847 |
| BXD01 | -1.083 | -1.408 |
| BXD010 | -0.928 | -1.154 |
| BXD011 | -0.508 | -1.787 |
| BXD03 | -1.796 | -0.709 |
| BXD04 | -2.196 | -1.668 |
| BXD05 | -1.197 | -1.58 |
| BXD06 | -0.9 | -2.031 |
| BXD07 | -1.719 | -0.865 |
| BXD08 | -1.708 | -1.648 |
| BXD09 | -1.337 | -1.823 |
| CAST | -3.934 | -4.521 |
| CCcont | 0.294 | 0.164 |
| DS01 | -0.855 | -3.112 |
| DS02 | -2.363 | -2.247 |
| DS04 | -2.861 | -2.403 |
| DS0c | -0.597 | -3.556 |
| GP01 | 0.65 | -1.342 |
| GP02 | -0.765 | -1.544 |
| GP0c | 0.991 | 0.143 |
| NOD | -3.197 | -2.086 |
| NZO | -4.187 | -2.913 |
| PWK | -3.483 | -2.911 |
| H37Rv_KO_CtpC | -2.312 | -1.665 |
| H37Rv_KO_CtpD | -0.918 | -1.476 |
| H37Rv_KO_Rv1272 | -0.093 | -1.038 |
| H37Rv_KO_SugABC | -1.461 | -2.355 |
| H37Rv_KO_MbtN | 0.672 | -0.355 |
| Trans05 | -0.197 | -1.833 |
| macrophage_unactivated | 0.0 | 0.455 |
| IL1 | 0.792 | 0.498 |
| Rapamycin | -0.387 | 0.381 |
| Tcell | 0.613 | 0.785 |
| GMCSF | -0.333 | 0.304 |
| IFNab | 0.532 | 0.568 |
| IFNg | 0.174 | 1.074 |
| IFNg_GMCSF1 | -0.305 | -0.201 |
| Rv1432_day32 | -3.476 | -2.768 |
| Rv1565c_day32 | -2.726 | -3.668 |
| secA2_input | 0.753 | 0.41 |
| delta_Rv3594 | 0.311 | -1.065 |
| delta_Rv3717 | 0.034 | -0.643 |
| delta_Rv3811 | 0.32 | -1.124 |
| delta_Rv0954 | -0.305 | -0.119 |
| PonA1 | 0.275 | -0.542 |
| EccD1_KO | 0.299 | -0.273 |
| EspI_KO | -0.151 | -0.599 |
| PE35_KO | -0.219 | -0.347 |
| PPE68_KO | -0.134 | -0.88 |
| glycerol2 | 1.739 | 0.399 |
| lignocerate | -0.924 | 0.704 |
| oleate | -0.651 | 0.678 |
| phosphatidylcholine | -0.913 | 0.769 |
| acetate | 0.823 | -0.101 |
| glucAc | 0.815 | -0.128 |
| Rv0950ko | 0.205 | -0.069 |
| Rv1096ko | 0.464 | 0.235 |
| Rv3684ko | 0.963 | -0.226 |
| delta_otsA_trehalose | 1.294 | 0.088 |