Top 10 genes with highest correlation to Rv3868/eccA1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1235/lpqY | (cc=0.7865) | info on Rv1235/lpqY |
| Rv1236/sugA | (cc=0.7757) | info on Rv1236/sugA |
| Rv0485/- | (cc=0.7564) | info on Rv0485/- |
| Rv1405c/- | (cc=0.7555) | info on Rv1405c/- |
| Rv1568/bioA | (cc=0.7453) | info on Rv1568/bioA |
| Rv0101/nrp | (cc=0.7444) | info on Rv0101/nrp |
| Rv1590/- | (cc=0.7394) | info on Rv1590/- |
| Rv1589/bioB | (cc=0.7362) | info on Rv1589/bioB |
| Rv3870/eccCa1 | (cc=0.7265) | info on Rv3870/eccCa1 |
| Rv3544c/fadE28 | (cc=0.7151) | info on Rv3544c/fadE28 |
Correlation of Rv3868/eccA1 with Rv0101/nrp
Normalized LFCs for Rv3868/eccA1:
(description and provenance of datasets)
| Rv3868/eccA1 | Rv0101/nrp | |
| Fe_supp_jason_reseq | -1.119 | -0.475 |
| low_pH_jason_reseq | -0.226 | 0.0 |
| NO_jason_reseq | -0.428 | 0.037 |
| B6_jason_reseq | -2.84 | -1.33 |
| MHCII_jason_reseq | -3.272 | -2.431 |
| Isoniazid02 | -0.314 | 0.493 |
| Rifampicin4 | 0.0 | -0.319 |
| Ethambutol3 | 0.492 | 0.604 |
| Meropenem3 | -0.272 | 0.788 |
| Vancomycin16 | -0.027 | -0.154 |
| Rv2680_day32 | -2.328 | -2.166 |
| H37Rv_KO_MarP | 0.158 | 0.257 |
| hypoxia_3wks | 0.666 | 0.06 |
| hypoxia_6wks | 0.852 | 0.0 |
| glycerol | -0.556 | -0.037 |
| cholesterol | 0.018 | 1.361 |
| AJ | -4.466 | -3.82 |
| Bibs02 | -1.574 | -1.358 |
| Bibs02c | -1.925 | -0.732 |
| BL6 | -1.983 | -1.049 |
| BL6a | -1.949 | -1.621 |
| BXD01 | -1.083 | -1.449 |
| BXD010 | -0.928 | -0.882 |
| BXD011 | -0.508 | -1.018 |
| BXD03 | -1.796 | -0.908 |
| BXD04 | -2.196 | -1.14 |
| BXD05 | -1.197 | -0.904 |
| BXD06 | -0.9 | -1.934 |
| BXD07 | -1.719 | -1.08 |
| BXD08 | -1.708 | -0.433 |
| BXD09 | -1.337 | -1.564 |
| CAST | -3.934 | -3.177 |
| CCcont | 0.294 | -0.599 |
| DS01 | -0.855 | 0.337 |
| DS02 | -2.363 | 1.878 |
| DS04 | -2.861 | -1.789 |
| DS0c | -0.597 | -0.226 |
| GP01 | 0.65 | -1.073 |
| GP02 | -0.765 | -1.148 |
| GP0c | 0.991 | -0.149 |
| NOD | -3.197 | -2.023 |
| NZO | -4.187 | -3.664 |
| PWK | -3.483 | -3.066 |
| H37Rv_KO_CtpC | -2.312 | -1.607 |
| H37Rv_KO_CtpD | -0.918 | -0.196 |
| H37Rv_KO_Rv1272 | -0.093 | -0.643 |
| H37Rv_KO_SugABC | -1.461 | 0.527 |
| H37Rv_KO_MbtN | 0.672 | 0.485 |
| Trans05 | -0.197 | -0.73 |
| macrophage_unactivated | 0.0 | 0.786 |
| IL1 | 0.792 | -0.653 |
| Rapamycin | -0.387 | -0.325 |
| Tcell | 0.613 | -0.228 |
| GMCSF | -0.333 | 0.911 |
| IFNab | 0.532 | 1.394 |
| IFNg | 0.174 | 0.219 |
| IFNg_GMCSF1 | -0.305 | 0.408 |
| Rv1432_day32 | -3.476 | -2.588 |
| Rv1565c_day32 | -2.726 | -3.349 |
| secA2_input | 0.753 | 0.348 |
| delta_Rv3594 | 0.311 | -0.257 |
| delta_Rv3717 | 0.034 | -0.045 |
| delta_Rv3811 | 0.32 | 0.152 |
| delta_Rv0954 | -0.305 | 0.152 |
| PonA1 | 0.275 | -1.675 |
| EccD1_KO | 0.299 | -0.132 |
| EspI_KO | -0.151 | -0.188 |
| PE35_KO | -0.219 | -0.155 |
| PPE68_KO | -0.134 | -0.211 |
| glycerol2 | 1.739 | 0.052 |
| lignocerate | -0.924 | -0.222 |
| oleate | -0.651 | -0.352 |
| phosphatidylcholine | -0.913 | -0.286 |
| acetate | 0.823 | -0.032 |
| glucAc | 0.815 | -0.02 |
| Rv0950ko | 0.205 | -0.096 |
| Rv1096ko | 0.464 | 1.028 |
| Rv3684ko | 0.963 | 0.403 |
| delta_otsA_trehalose | 1.294 | 0.119 |