Top 10 genes with highest correlation to Rv3868/eccA1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1235/lpqY | (cc=0.7865) | info on Rv1235/lpqY |
| Rv1236/sugA | (cc=0.7757) | info on Rv1236/sugA |
| Rv0485/- | (cc=0.7564) | info on Rv0485/- |
| Rv1405c/- | (cc=0.7555) | info on Rv1405c/- |
| Rv1568/bioA | (cc=0.7453) | info on Rv1568/bioA |
| Rv0101/nrp | (cc=0.7444) | info on Rv0101/nrp |
| Rv1590/- | (cc=0.7394) | info on Rv1590/- |
| Rv1589/bioB | (cc=0.7362) | info on Rv1589/bioB |
| Rv3870/eccCa1 | (cc=0.7265) | info on Rv3870/eccCa1 |
| Rv3544c/fadE28 | (cc=0.7151) | info on Rv3544c/fadE28 |
Correlation of Rv3868/eccA1 with Rv1235/lpqY
Normalized LFCs for Rv3868/eccA1:
(description and provenance of datasets)
| Rv3868/eccA1 | Rv1235/lpqY | |
| Fe_supp_jason_reseq | -1.119 | -0.923 |
| low_pH_jason_reseq | -0.226 | -0.507 |
| NO_jason_reseq | -0.428 | -0.034 |
| B6_jason_reseq | -2.84 | -1.41 |
| MHCII_jason_reseq | -3.272 | -2.564 |
| Isoniazid02 | -0.314 | -1.036 |
| Rifampicin4 | 0.0 | 0.609 |
| Ethambutol3 | 0.492 | 0.051 |
| Meropenem3 | -0.272 | -1.357 |
| Vancomycin16 | -0.027 | 0.164 |
| Rv2680_day32 | -2.328 | -2.577 |
| H37Rv_KO_MarP | 0.158 | 0.835 |
| hypoxia_3wks | 0.666 | 0.471 |
| hypoxia_6wks | 0.852 | 0.716 |
| glycerol | -0.556 | -0.418 |
| cholesterol | 0.018 | -0.035 |
| AJ | -4.466 | -2.262 |
| Bibs02 | -1.574 | -1.576 |
| Bibs02c | -1.925 | -1.175 |
| BL6 | -1.983 | -1.827 |
| BL6a | -1.949 | -1.458 |
| BXD01 | -1.083 | -1.842 |
| BXD010 | -0.928 | -1.369 |
| BXD011 | -0.508 | -1.801 |
| BXD03 | -1.796 | -2.182 |
| BXD04 | -2.196 | -0.292 |
| BXD05 | -1.197 | -2.172 |
| BXD06 | -0.9 | -1.664 |
| BXD07 | -1.719 | -1.392 |
| BXD08 | -1.708 | -1.658 |
| BXD09 | -1.337 | -1.647 |
| CAST | -3.934 | -3.717 |
| CCcont | 0.294 | -0.331 |
| DS01 | -0.855 | -1.576 |
| DS02 | -2.363 | -1.994 |
| DS04 | -2.861 | -2.927 |
| DS0c | -0.597 | -1.648 |
| GP01 | 0.65 | -1.089 |
| GP02 | -0.765 | -1.39 |
| GP0c | 0.991 | 0.015 |
| NOD | -3.197 | -3.389 |
| NZO | -4.187 | -2.006 |
| PWK | -3.483 | -3.277 |
| H37Rv_KO_CtpC | -2.312 | -1.048 |
| H37Rv_KO_CtpD | -0.918 | -0.5 |
| H37Rv_KO_Rv1272 | -0.093 | -1.653 |
| H37Rv_KO_SugABC | -1.461 | -0.661 |
| H37Rv_KO_MbtN | 0.672 | -0.128 |
| Trans05 | -0.197 | 0.089 |
| macrophage_unactivated | 0.0 | 0.0 |
| IL1 | 0.792 | 1.1 |
| Rapamycin | -0.387 | 0.997 |
| Tcell | 0.613 | -0.244 |
| GMCSF | -0.333 | 0.826 |
| IFNab | 0.532 | 0.692 |
| IFNg | 0.174 | 0.577 |
| IFNg_GMCSF1 | -0.305 | 0.396 |
| Rv1432_day32 | -3.476 | -2.173 |
| Rv1565c_day32 | -2.726 | -1.989 |
| secA2_input | 0.753 | -0.601 |
| delta_Rv3594 | 0.311 | 0.083 |
| delta_Rv3717 | 0.034 | -0.701 |
| delta_Rv3811 | 0.32 | -0.232 |
| delta_Rv0954 | -0.305 | -0.459 |
| PonA1 | 0.275 | -0.111 |
| EccD1_KO | 0.299 | -0.27 |
| EspI_KO | -0.151 | -0.057 |
| PE35_KO | -0.219 | -0.178 |
| PPE68_KO | -0.134 | -0.474 |
| glycerol2 | 1.739 | -0.383 |
| lignocerate | -0.924 | -0.459 |
| oleate | -0.651 | 0.244 |
| phosphatidylcholine | -0.913 | 0.0 |
| acetate | 0.823 | -0.231 |
| glucAc | 0.815 | -0.412 |
| Rv0950ko | 0.205 | 0.329 |
| Rv1096ko | 0.464 | 0.63 |
| Rv3684ko | 0.963 | 0.874 |
| delta_otsA_trehalose | 1.294 | 0.0 |