Top 10 genes with highest correlation to Rv3760/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0351/grpE | (cc=0.4979) | info on Rv0351/grpE |
| Rv2129c/- | (cc=0.4871) | info on Rv2129c/- |
| Rv3379c/dxs2 | (cc=0.4539) | info on Rv3379c/dxs2 |
| Rv2530c/vapC39 | (cc=0.4343) | info on Rv2530c/vapC39 |
| Rv1949c/- | (cc=0.428) | info on Rv1949c/- |
| Rv1116/- | (cc=0.4277) | info on Rv1116/- |
| Rv1664/pks9 | (cc=0.4275) | info on Rv1664/pks9 |
| Rv1984c/cfp21 | (cc=0.4244) | info on Rv1984c/cfp21 |
| Rv2757c/vapC21 | (cc=0.421) | info on Rv2757c/vapC21 |
| Rv0469/umaA | (cc=0.4209) | info on Rv0469/umaA |
Correlation of Rv3760/- with Rv2129c/-
Normalized LFCs for Rv3760/-:
(description and provenance of datasets)
| Rv3760/- | Rv2129c/- | |
| Fe_supp_jason_reseq | 2.259 | 0.497 |
| low_pH_jason_reseq | 1.4 | 0.146 |
| NO_jason_reseq | 1.754 | -0.244 |
| B6_jason_reseq | -0.799 | -0.487 |
| MHCII_jason_reseq | -2.059 | -0.909 |
| Isoniazid02 | 0.252 | -0.275 |
| Rifampicin4 | 0.593 | 0.301 |
| Ethambutol3 | -0.314 | 0.261 |
| Meropenem3 | -0.031 | -0.302 |
| Vancomycin16 | 0.034 | 0.353 |
| Rv2680_day32 | -3.356 | -1.274 |
| H37Rv_KO_MarP | 0.569 | -0.158 |
| hypoxia_3wks | 1.487 | 0.132 |
| hypoxia_6wks | 0.054 | -0.088 |
| glycerol | -0.622 | -0.424 |
| cholesterol | -0.404 | -0.445 |
| AJ | 0.711 | -0.113 |
| Bibs02 | -0.735 | -0.301 |
| Bibs02c | 0.135 | -1.02 |
| BL6 | -2.023 | -1.14 |
| BL6a | 0.854 | -0.019 |
| BXD01 | 0.899 | 0.107 |
| BXD010 | 0.186 | 0.884 |
| BXD011 | 0.894 | 0.999 |
| BXD03 | -1.357 | 0.88 |
| BXD04 | 0.781 | 0.124 |
| BXD05 | -0.375 | 0.298 |
| BXD06 | 0.293 | 0.702 |
| BXD07 | -0.512 | 0.543 |
| BXD08 | -0.061 | 0.45 |
| BXD09 | 0.626 | 0.586 |
| CAST | -1.246 | -0.889 |
| CCcont | -2.416 | -0.895 |
| DS01 | 0.602 | -0.756 |
| DS02 | -1.942 | -1.093 |
| DS04 | -0.541 | -0.018 |
| DS0c | -1.524 | -0.96 |
| GP01 | 0.67 | -0.481 |
| GP02 | -0.098 | -1.021 |
| GP0c | 2.098 | -0.012 |
| NOD | 0.833 | -1.095 |
| NZO | -1.402 | -0.562 |
| PWK | -1.968 | -1.016 |
| H37Rv_KO_CtpC | 1.982 | 0.883 |
| H37Rv_KO_CtpD | -0.784 | 1.139 |
| H37Rv_KO_Rv1272 | 1.778 | 0.798 |
| H37Rv_KO_SugABC | 1.55 | 1.128 |
| H37Rv_KO_MbtN | -0.558 | 1.637 |
| Trans05 | 1.302 | 0.174 |
| macrophage_unactivated | 0.931 | 0.215 |
| IL1 | -1.783 | 0.727 |
| Rapamycin | -0.534 | 0.236 |
| Tcell | 1.215 | -0.13 |
| GMCSF | -2.308 | 0.755 |
| IFNab | -0.641 | 0.399 |
| IFNg | 0.414 | -0.216 |
| IFNg_GMCSF1 | 0.0 | -0.126 |
| Rv1432_day32 | -0.793 | 0.263 |
| Rv1565c_day32 | 0.16 | -0.22 |
| secA2_input | 0.028 | -0.578 |
| delta_Rv3594 | -0.951 | 0.505 |
| delta_Rv3717 | -2.154 | 0.385 |
| delta_Rv3811 | -1.862 | -0.089 |
| delta_Rv0954 | -1.771 | 0.354 |
| PonA1 | -1.08 | 0.0 |
| EccD1_KO | -2.43 | -1.677 |
| EspI_KO | -1.406 | -1.064 |
| PE35_KO | -1.12 | -0.989 |
| PPE68_KO | -0.493 | -1.085 |
| glycerol2 | -0.219 | -0.276 |
| lignocerate | -1.533 | -1.167 |
| oleate | -0.774 | 0.116 |
| phosphatidylcholine | 0.197 | -0.381 |
| acetate | -2.668 | -1.99 |
| glucAc | -3.998 | -2.429 |
| Rv0950ko | 0.585 | 0.467 |
| Rv1096ko | 0.175 | 0.389 |
| Rv3684ko | -0.888 | -0.033 |
| delta_otsA_trehalose | -0.274 | 0.013 |