Top 10 genes with highest correlation to Rv3760/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0351/grpE | (cc=0.4979) | info on Rv0351/grpE |
| Rv2129c/- | (cc=0.4871) | info on Rv2129c/- |
| Rv3379c/dxs2 | (cc=0.4539) | info on Rv3379c/dxs2 |
| Rv2530c/vapC39 | (cc=0.4343) | info on Rv2530c/vapC39 |
| Rv1949c/- | (cc=0.428) | info on Rv1949c/- |
| Rv1116/- | (cc=0.4277) | info on Rv1116/- |
| Rv1664/pks9 | (cc=0.4275) | info on Rv1664/pks9 |
| Rv1984c/cfp21 | (cc=0.4244) | info on Rv1984c/cfp21 |
| Rv2757c/vapC21 | (cc=0.421) | info on Rv2757c/vapC21 |
| Rv0469/umaA | (cc=0.4209) | info on Rv0469/umaA |
Correlation of Rv3760/- with Rv1116/-
Normalized LFCs for Rv3760/-:
(description and provenance of datasets)
| Rv3760/- | Rv1116/- | |
| Fe_supp_jason_reseq | 2.259 | -0.079 |
| low_pH_jason_reseq | 1.4 | 1.563 |
| NO_jason_reseq | 1.754 | -0.937 |
| B6_jason_reseq | -0.799 | -0.775 |
| MHCII_jason_reseq | -2.059 | -2.185 |
| Isoniazid02 | 0.252 | -0.202 |
| Rifampicin4 | 0.593 | -0.793 |
| Ethambutol3 | -0.314 | -0.469 |
| Meropenem3 | -0.031 | -0.329 |
| Vancomycin16 | 0.034 | -0.544 |
| Rv2680_day32 | -3.356 | -3.002 |
| H37Rv_KO_MarP | 0.569 | 0.209 |
| hypoxia_3wks | 1.487 | 0.881 |
| hypoxia_6wks | 0.054 | 0.315 |
| glycerol | -0.622 | -2.319 |
| cholesterol | -0.404 | -1.265 |
| AJ | 0.711 | -0.866 |
| Bibs02 | -0.735 | -0.507 |
| Bibs02c | 0.135 | 1.479 |
| BL6 | -2.023 | 1.089 |
| BL6a | 0.854 | 3.068 |
| BXD01 | 0.899 | 1.975 |
| BXD010 | 0.186 | 3.315 |
| BXD011 | 0.894 | 2.491 |
| BXD03 | -1.357 | 2.737 |
| BXD04 | 0.781 | 2.569 |
| BXD05 | -0.375 | 2.73 |
| BXD06 | 0.293 | 2.452 |
| BXD07 | -0.512 | 2.972 |
| BXD08 | -0.061 | 2.685 |
| BXD09 | 0.626 | 2.084 |
| CAST | -1.246 | -0.859 |
| CCcont | -2.416 | 1.588 |
| DS01 | 0.602 | -0.352 |
| DS02 | -1.942 | -2.497 |
| DS04 | -0.541 | -1.405 |
| DS0c | -1.524 | -1.425 |
| GP01 | 0.67 | 2.097 |
| GP02 | -0.098 | -0.353 |
| GP0c | 2.098 | 2.178 |
| NOD | 0.833 | -0.623 |
| NZO | -1.402 | -2.29 |
| PWK | -1.968 | -1.563 |
| H37Rv_KO_CtpC | 1.982 | 3.593 |
| H37Rv_KO_CtpD | -0.784 | 1.121 |
| H37Rv_KO_Rv1272 | 1.778 | 1.482 |
| H37Rv_KO_SugABC | 1.55 | -0.321 |
| H37Rv_KO_MbtN | -0.558 | 1.349 |
| Trans05 | 1.302 | 1.761 |
| macrophage_unactivated | 0.931 | -1.727 |
| IL1 | -1.783 | -1.216 |
| Rapamycin | -0.534 | -0.414 |
| Tcell | 1.215 | -1.606 |
| GMCSF | -2.308 | -0.38 |
| IFNab | -0.641 | -0.46 |
| IFNg | 0.414 | -1.646 |
| IFNg_GMCSF1 | 0.0 | -0.723 |
| Rv1432_day32 | -0.793 | 0.0 |
| Rv1565c_day32 | 0.16 | -0.622 |
| secA2_input | 0.028 | 0.092 |
| delta_Rv3594 | -0.951 | -2.284 |
| delta_Rv3717 | -2.154 | -0.364 |
| delta_Rv3811 | -1.862 | 0.213 |
| delta_Rv0954 | -1.771 | -1.87 |
| PonA1 | -1.08 | -3.333 |
| EccD1_KO | -2.43 | 0.51 |
| EspI_KO | -1.406 | 1.934 |
| PE35_KO | -1.12 | 0.796 |
| PPE68_KO | -0.493 | 1.523 |
| glycerol2 | -0.219 | -1.516 |
| lignocerate | -1.533 | -1.445 |
| oleate | -0.774 | -0.045 |
| phosphatidylcholine | 0.197 | -0.403 |
| acetate | -2.668 | -1.837 |
| glucAc | -3.998 | -2.853 |
| Rv0950ko | 0.585 | 1.263 |
| Rv1096ko | 0.175 | 0.989 |
| Rv3684ko | -0.888 | 0.095 |
| delta_otsA_trehalose | -0.274 | 0.483 |