Top 10 genes with highest correlation to Rv3760/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0351/grpE | (cc=0.4979) | info on Rv0351/grpE |
| Rv2129c/- | (cc=0.4871) | info on Rv2129c/- |
| Rv3379c/dxs2 | (cc=0.4539) | info on Rv3379c/dxs2 |
| Rv2530c/vapC39 | (cc=0.4343) | info on Rv2530c/vapC39 |
| Rv1949c/- | (cc=0.428) | info on Rv1949c/- |
| Rv1116/- | (cc=0.4277) | info on Rv1116/- |
| Rv1664/pks9 | (cc=0.4275) | info on Rv1664/pks9 |
| Rv1984c/cfp21 | (cc=0.4244) | info on Rv1984c/cfp21 |
| Rv2757c/vapC21 | (cc=0.421) | info on Rv2757c/vapC21 |
| Rv0469/umaA | (cc=0.4209) | info on Rv0469/umaA |
Correlation of Rv3760/- with Rv1664/pks9
Normalized LFCs for Rv3760/-:
(description and provenance of datasets)
| Rv3760/- | Rv1664/pks9 | |
| Fe_supp_jason_reseq | 2.259 | 0.611 |
| low_pH_jason_reseq | 1.4 | 0.045 |
| NO_jason_reseq | 1.754 | 0.142 |
| B6_jason_reseq | -0.799 | -0.828 |
| MHCII_jason_reseq | -2.059 | -0.823 |
| Isoniazid02 | 0.252 | -0.615 |
| Rifampicin4 | 0.593 | 0.317 |
| Ethambutol3 | -0.314 | -0.916 |
| Meropenem3 | -0.031 | -0.43 |
| Vancomycin16 | 0.034 | -0.066 |
| Rv2680_day32 | -3.356 | -0.348 |
| H37Rv_KO_MarP | 0.569 | 0.185 |
| hypoxia_3wks | 1.487 | 0.1 |
| hypoxia_6wks | 0.054 | -0.109 |
| glycerol | -0.622 | 0.835 |
| cholesterol | -0.404 | 0.203 |
| AJ | 0.711 | -0.294 |
| Bibs02 | -0.735 | -0.642 |
| Bibs02c | 0.135 | -0.735 |
| BL6 | -2.023 | 0.357 |
| BL6a | 0.854 | 0.426 |
| BXD01 | 0.899 | 0.843 |
| BXD010 | 0.186 | 0.699 |
| BXD011 | 0.894 | 0.761 |
| BXD03 | -1.357 | 0.258 |
| BXD04 | 0.781 | 0.914 |
| BXD05 | -0.375 | 1.375 |
| BXD06 | 0.293 | 0.775 |
| BXD07 | -0.512 | 0.961 |
| BXD08 | -0.061 | 0.75 |
| BXD09 | 0.626 | 0.524 |
| CAST | -1.246 | -0.215 |
| CCcont | -2.416 | 0.618 |
| DS01 | 0.602 | 0.33 |
| DS02 | -1.942 | 0.246 |
| DS04 | -0.541 | 0.597 |
| DS0c | -1.524 | 0.717 |
| GP01 | 0.67 | 1.902 |
| GP02 | -0.098 | -0.078 |
| GP0c | 2.098 | 0.564 |
| NOD | 0.833 | -0.21 |
| NZO | -1.402 | -0.061 |
| PWK | -1.968 | -0.315 |
| H37Rv_KO_CtpC | 1.982 | 0.828 |
| H37Rv_KO_CtpD | -0.784 | 1.22 |
| H37Rv_KO_Rv1272 | 1.778 | 1.456 |
| H37Rv_KO_SugABC | 1.55 | 1.39 |
| H37Rv_KO_MbtN | -0.558 | 0.294 |
| Trans05 | 1.302 | 1.335 |
| macrophage_unactivated | 0.931 | 0.997 |
| IL1 | -1.783 | 0.866 |
| Rapamycin | -0.534 | 1.182 |
| Tcell | 1.215 | 1.105 |
| GMCSF | -2.308 | 1.017 |
| IFNab | -0.641 | 0.955 |
| IFNg | 0.414 | 0.906 |
| IFNg_GMCSF1 | 0.0 | 0.525 |
| Rv1432_day32 | -0.793 | -0.142 |
| Rv1565c_day32 | 0.16 | 0.531 |
| secA2_input | 0.028 | -0.65 |
| delta_Rv3594 | -0.951 | -0.311 |
| delta_Rv3717 | -2.154 | -1.008 |
| delta_Rv3811 | -1.862 | -0.47 |
| delta_Rv0954 | -1.771 | -0.74 |
| PonA1 | -1.08 | -0.744 |
| EccD1_KO | -2.43 | -0.549 |
| EspI_KO | -1.406 | -0.935 |
| PE35_KO | -1.12 | -0.563 |
| PPE68_KO | -0.493 | -0.454 |
| glycerol2 | -0.219 | -0.862 |
| lignocerate | -1.533 | -0.721 |
| oleate | -0.774 | -0.364 |
| phosphatidylcholine | 0.197 | -0.623 |
| acetate | -2.668 | -0.806 |
| glucAc | -3.998 | -0.808 |
| Rv0950ko | 0.585 | -0.371 |
| Rv1096ko | 0.175 | 0.277 |
| Rv3684ko | -0.888 | -0.665 |
| delta_otsA_trehalose | -0.274 | 1.396 |