Top 10 genes with highest correlation to Rv3755c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1112/- | (cc=0.5657) | info on Rv1112/- |
| Rv1079/metB | (cc=0.5299) | info on Rv1079/metB |
| Rv3624c/hpt | (cc=0.4788) | info on Rv3624c/hpt |
| Rv1638/uvrA | (cc=0.4773) | info on Rv1638/uvrA |
| Rv0155/pntAa | (cc=0.4747) | info on Rv0155/pntAa |
| Rv3433c/- | (cc=0.472) | info on Rv3433c/- |
| Rv2222c/glnA2 | (cc=0.462) | info on Rv2222c/glnA2 |
| Rv2929/- | (cc=0.448) | info on Rv2929/- |
| Rv1173/fbiC | (cc=0.4458) | info on Rv1173/fbiC |
| Rv1196/PPE18 | (cc=0.4431) | info on Rv1196/PPE18 |
Correlation of Rv3755c/- with Rv1638/uvrA
Normalized LFCs for Rv3755c/-:
(description and provenance of datasets)
| Rv3755c/- | Rv1638/uvrA | |
| Fe_supp_jason_reseq | 0.706 | 2.005 |
| low_pH_jason_reseq | -0.979 | -0.842 |
| NO_jason_reseq | -0.969 | -0.874 |
| B6_jason_reseq | -2.07 | -1.019 |
| MHCII_jason_reseq | -2.8 | -1.251 |
| Isoniazid02 | 3.111 | -0.061 |
| Rifampicin4 | -0.344 | -1.11 |
| Ethambutol3 | 0.705 | 0.542 |
| Meropenem3 | 1.452 | -0.628 |
| Vancomycin16 | 0.382 | -0.764 |
| Rv2680_day32 | -1.501 | 0.0 |
| H37Rv_KO_MarP | 1.008 | -0.563 |
| hypoxia_3wks | -1.232 | -1.204 |
| hypoxia_6wks | -1.029 | -1.817 |
| glycerol | -0.471 | 1.654 |
| cholesterol | 1.302 | 0.773 |
| AJ | 0.129 | -0.242 |
| Bibs02 | -0.034 | -0.294 |
| Bibs02c | 0.0 | 0.382 |
| BL6 | -0.384 | 0.63 |
| BL6a | 0.558 | 0.997 |
| BXD01 | 0.347 | 0.486 |
| BXD010 | 0.999 | -0.206 |
| BXD011 | -0.424 | 0.475 |
| BXD03 | 1.706 | 0.189 |
| BXD04 | 1.988 | 0.372 |
| BXD05 | -0.052 | 0.3 |
| BXD06 | 1.243 | 0.498 |
| BXD07 | 0.22 | 0.194 |
| BXD08 | 0.775 | 0.297 |
| BXD09 | 0.312 | 0.572 |
| CAST | -0.23 | -0.809 |
| CCcont | 1.48 | 2.708 |
| DS01 | 0.45 | -0.12 |
| DS02 | 0.159 | 0.0 |
| DS04 | 0.275 | 0.094 |
| DS0c | 1.53 | 0.652 |
| GP01 | -1.412 | -0.28 |
| GP02 | -1.324 | 0.339 |
| GP0c | -1.245 | 0.942 |
| NOD | -0.042 | -1.126 |
| NZO | -0.419 | -0.701 |
| PWK | 1.142 | -0.433 |
| H37Rv_KO_CtpC | 0.946 | 1.331 |
| H37Rv_KO_CtpD | 1.742 | 0.558 |
| H37Rv_KO_Rv1272 | 0.896 | 0.71 |
| H37Rv_KO_SugABC | 0.736 | 1.472 |
| H37Rv_KO_MbtN | 0.518 | 1.713 |
| Trans05 | -0.025 | 0.344 |
| macrophage_unactivated | 0.587 | 1.382 |
| IL1 | -2.367 | -0.436 |
| Rapamycin | -0.853 | -0.295 |
| Tcell | 0.857 | 0.0 |
| GMCSF | 0.048 | -0.671 |
| IFNab | -0.112 | 0.771 |
| IFNg | -1.89 | -0.679 |
| IFNg_GMCSF1 | -1.458 | -0.625 |
| Rv1432_day32 | -1.254 | -1.562 |
| Rv1565c_day32 | -1.842 | -0.269 |
| secA2_input | -1.313 | 0.783 |
| delta_Rv3594 | 0.387 | 0.39 |
| delta_Rv3717 | 0.346 | -0.415 |
| delta_Rv3811 | -0.109 | 0.095 |
| delta_Rv0954 | 0.903 | 0.499 |
| PonA1 | -0.329 | -0.504 |
| EccD1_KO | 0.572 | 0.329 |
| EspI_KO | -0.057 | -0.128 |
| PE35_KO | 0.131 | 0.817 |
| PPE68_KO | -0.064 | 1.161 |
| glycerol2 | -1.46 | -1.562 |
| lignocerate | -1.578 | -1.816 |
| oleate | -0.903 | -1.904 |
| phosphatidylcholine | -1.55 | -2.088 |
| acetate | -0.214 | -0.143 |
| glucAc | -0.168 | 0.356 |
| Rv0950ko | 0.549 | -0.302 |
| Rv1096ko | -0.362 | -0.663 |
| Rv3684ko | 0.786 | -0.72 |
| delta_otsA_trehalose | -0.952 | 0.081 |