Top 10 genes with highest correlation to Rv3755c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1112/- | (cc=0.5657) | info on Rv1112/- |
| Rv1079/metB | (cc=0.5299) | info on Rv1079/metB |
| Rv3624c/hpt | (cc=0.4788) | info on Rv3624c/hpt |
| Rv1638/uvrA | (cc=0.4773) | info on Rv1638/uvrA |
| Rv0155/pntAa | (cc=0.4747) | info on Rv0155/pntAa |
| Rv3433c/- | (cc=0.472) | info on Rv3433c/- |
| Rv2222c/glnA2 | (cc=0.462) | info on Rv2222c/glnA2 |
| Rv2929/- | (cc=0.448) | info on Rv2929/- |
| Rv1173/fbiC | (cc=0.4458) | info on Rv1173/fbiC |
| Rv1196/PPE18 | (cc=0.4431) | info on Rv1196/PPE18 |
Correlation of Rv3755c/- with Rv1079/metB
Normalized LFCs for Rv3755c/-:
(description and provenance of datasets)
| Rv3755c/- | Rv1079/metB | |
| Fe_supp_jason_reseq | 0.706 | 0.647 |
| low_pH_jason_reseq | -0.979 | -0.433 |
| NO_jason_reseq | -0.969 | -1.733 |
| B6_jason_reseq | -2.07 | -0.523 |
| MHCII_jason_reseq | -2.8 | -1.319 |
| Isoniazid02 | 3.111 | 1.083 |
| Rifampicin4 | -0.344 | 0.466 |
| Ethambutol3 | 0.705 | 0.364 |
| Meropenem3 | 1.452 | 0.29 |
| Vancomycin16 | 0.382 | 0.377 |
| Rv2680_day32 | -1.501 | 0.109 |
| H37Rv_KO_MarP | 1.008 | 0.0 |
| hypoxia_3wks | -1.232 | 0.534 |
| hypoxia_6wks | -1.029 | -0.182 |
| glycerol | -0.471 | -0.932 |
| cholesterol | 1.302 | 0.614 |
| AJ | 0.129 | 0.044 |
| Bibs02 | -0.034 | -0.069 |
| Bibs02c | 0.0 | 0.039 |
| BL6 | -0.384 | 0.918 |
| BL6a | 0.558 | 0.432 |
| BXD01 | 0.347 | 0.343 |
| BXD010 | 0.999 | 0.136 |
| BXD011 | -0.424 | -0.233 |
| BXD03 | 1.706 | 0.639 |
| BXD04 | 1.988 | 0.787 |
| BXD05 | -0.052 | 0.773 |
| BXD06 | 1.243 | 0.208 |
| BXD07 | 0.22 | 0.621 |
| BXD08 | 0.775 | 0.0 |
| BXD09 | 0.312 | 0.664 |
| CAST | -0.23 | -0.871 |
| CCcont | 1.48 | 1.35 |
| DS01 | 0.45 | -0.044 |
| DS02 | 0.159 | -0.654 |
| DS04 | 0.275 | -1.012 |
| DS0c | 1.53 | 0.506 |
| GP01 | -1.412 | 0.122 |
| GP02 | -1.324 | -0.701 |
| GP0c | -1.245 | 0.303 |
| NOD | -0.042 | -0.042 |
| NZO | -0.419 | -0.551 |
| PWK | 1.142 | 0.142 |
| H37Rv_KO_CtpC | 0.946 | 1.146 |
| H37Rv_KO_CtpD | 1.742 | 1.041 |
| H37Rv_KO_Rv1272 | 0.896 | -0.611 |
| H37Rv_KO_SugABC | 0.736 | -0.755 |
| H37Rv_KO_MbtN | 0.518 | 1.662 |
| Trans05 | -0.025 | -0.393 |
| macrophage_unactivated | 0.587 | 0.426 |
| IL1 | -2.367 | -0.653 |
| Rapamycin | -0.853 | -0.147 |
| Tcell | 0.857 | -0.371 |
| GMCSF | 0.048 | -0.301 |
| IFNab | -0.112 | 0.698 |
| IFNg | -1.89 | 0.0 |
| IFNg_GMCSF1 | -1.458 | 0.286 |
| Rv1432_day32 | -1.254 | -0.43 |
| Rv1565c_day32 | -1.842 | -2.263 |
| secA2_input | -1.313 | 0.348 |
| delta_Rv3594 | 0.387 | 1.758 |
| delta_Rv3717 | 0.346 | 0.812 |
| delta_Rv3811 | -0.109 | 1.08 |
| delta_Rv0954 | 0.903 | 1.114 |
| PonA1 | -0.329 | 1.012 |
| EccD1_KO | 0.572 | -0.122 |
| EspI_KO | -0.057 | 0.0 |
| PE35_KO | 0.131 | 0.543 |
| PPE68_KO | -0.064 | 0.058 |
| glycerol2 | -1.46 | -0.343 |
| lignocerate | -1.578 | -1.108 |
| oleate | -0.903 | -0.583 |
| phosphatidylcholine | -1.55 | -1.615 |
| acetate | -0.214 | -1.277 |
| glucAc | -0.168 | -0.771 |
| Rv0950ko | 0.549 | 1.049 |
| Rv1096ko | -0.362 | 0.808 |
| Rv3684ko | 0.786 | 1.182 |
| delta_otsA_trehalose | -0.952 | 0.064 |