Top 10 genes with highest correlation to Rv3755c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1112/- | (cc=0.5657) | info on Rv1112/- |
| Rv1079/metB | (cc=0.5299) | info on Rv1079/metB |
| Rv3624c/hpt | (cc=0.4788) | info on Rv3624c/hpt |
| Rv1638/uvrA | (cc=0.4773) | info on Rv1638/uvrA |
| Rv0155/pntAa | (cc=0.4747) | info on Rv0155/pntAa |
| Rv3433c/- | (cc=0.472) | info on Rv3433c/- |
| Rv2222c/glnA2 | (cc=0.462) | info on Rv2222c/glnA2 |
| Rv2929/- | (cc=0.448) | info on Rv2929/- |
| Rv1173/fbiC | (cc=0.4458) | info on Rv1173/fbiC |
| Rv1196/PPE18 | (cc=0.4431) | info on Rv1196/PPE18 |
Correlation of Rv3755c/- with Rv1112/-
Normalized LFCs for Rv3755c/-:
(description and provenance of datasets)
| Rv3755c/- | Rv1112/- | |
| Fe_supp_jason_reseq | 0.706 | 1.901 |
| low_pH_jason_reseq | -0.979 | -1.571 |
| NO_jason_reseq | -0.969 | 0.315 |
| B6_jason_reseq | -2.07 | -0.913 |
| MHCII_jason_reseq | -2.8 | 0.0 |
| Isoniazid02 | 3.111 | 3.87 |
| Rifampicin4 | -0.344 | 0.712 |
| Ethambutol3 | 0.705 | 1.414 |
| Meropenem3 | 1.452 | 0.426 |
| Vancomycin16 | 0.382 | 1.602 |
| Rv2680_day32 | -1.501 | 0.109 |
| H37Rv_KO_MarP | 1.008 | 2.428 |
| hypoxia_3wks | -1.232 | -2.68 |
| hypoxia_6wks | -1.029 | -2.533 |
| glycerol | -0.471 | 2.487 |
| cholesterol | 1.302 | 1.62 |
| AJ | 0.129 | 1.78 |
| Bibs02 | -0.034 | 0.0 |
| Bibs02c | 0.0 | 0.0 |
| BL6 | -0.384 | 1.574 |
| BL6a | 0.558 | 1.964 |
| BXD01 | 0.347 | 1.496 |
| BXD010 | 0.999 | 1.739 |
| BXD011 | -0.424 | 0.612 |
| BXD03 | 1.706 | 1.146 |
| BXD04 | 1.988 | 1.588 |
| BXD05 | -0.052 | 1.241 |
| BXD06 | 1.243 | 2.098 |
| BXD07 | 0.22 | 0.809 |
| BXD08 | 0.775 | 1.227 |
| BXD09 | 0.312 | 2.005 |
| CAST | -0.23 | 1.458 |
| CCcont | 1.48 | 4.277 |
| DS01 | 0.45 | 0.551 |
| DS02 | 0.159 | 0.35 |
| DS04 | 0.275 | 1.32 |
| DS0c | 1.53 | 0.652 |
| GP01 | -1.412 | 0.36 |
| GP02 | -1.324 | -0.159 |
| GP0c | -1.245 | -0.248 |
| NOD | -0.042 | 2.071 |
| NZO | -0.419 | 1.357 |
| PWK | 1.142 | 0.715 |
| H37Rv_KO_CtpC | 0.946 | 0.0 |
| H37Rv_KO_CtpD | 1.742 | 1.689 |
| H37Rv_KO_Rv1272 | 0.896 | 0.753 |
| H37Rv_KO_SugABC | 0.736 | 1.666 |
| H37Rv_KO_MbtN | 0.518 | 1.959 |
| Trans05 | -0.025 | 0.628 |
| macrophage_unactivated | 0.587 | 0.571 |
| IL1 | -2.367 | -1.326 |
| Rapamycin | -0.853 | -0.307 |
| Tcell | 0.857 | 0.303 |
| GMCSF | 0.048 | -0.85 |
| IFNab | -0.112 | 0.795 |
| IFNg | -1.89 | -1.563 |
| IFNg_GMCSF1 | -1.458 | -0.647 |
| Rv1432_day32 | -1.254 | 1.155 |
| Rv1565c_day32 | -1.842 | -0.256 |
| secA2_input | -1.313 | -0.676 |
| delta_Rv3594 | 0.387 | 4.577 |
| delta_Rv3717 | 0.346 | 4.406 |
| delta_Rv3811 | -0.109 | 3.248 |
| delta_Rv0954 | 0.903 | 0.969 |
| PonA1 | -0.329 | -0.245 |
| EccD1_KO | 0.572 | -1.542 |
| EspI_KO | -0.057 | -1.879 |
| PE35_KO | 0.131 | -0.548 |
| PPE68_KO | -0.064 | -0.902 |
| glycerol2 | -1.46 | 0.395 |
| lignocerate | -1.578 | -0.764 |
| oleate | -0.903 | -0.588 |
| phosphatidylcholine | -1.55 | -1.751 |
| acetate | -0.214 | 1.536 |
| glucAc | -0.168 | 2.08 |
| Rv0950ko | 0.549 | 0.862 |
| Rv1096ko | -0.362 | 0.398 |
| Rv3684ko | 0.786 | 0.829 |
| delta_otsA_trehalose | -0.952 | 0.4 |