Top 10 genes with highest correlation to Rv3706c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1200/- | (cc=0.4448) | info on Rv1200/- |
| Rv0847/lpqS | (cc=0.4347) | info on Rv0847/lpqS |
| Rv0488/- | (cc=0.4342) | info on Rv0488/- |
| Rv1232c/- | (cc=0.4146) | info on Rv1232c/- |
| Rv2328/PE23 | (cc=0.4095) | info on Rv2328/PE23 |
| Rv3576/lppH | (cc=0.4068) | info on Rv3576/lppH |
| Rv2550c/vapB20 | (cc=0.3911) | info on Rv2550c/vapB20 |
| Rv3664c/dppC | (cc=0.3851) | info on Rv3664c/dppC |
| Rv0906/- | (cc=0.3746) | info on Rv0906/- |
| Rv2208/cobS | (cc=0.3742) | info on Rv2208/cobS |
Correlation of Rv3706c/- with Rv3664c/dppC
Normalized LFCs for Rv3706c/-:
(description and provenance of datasets)
| Rv3706c/- | Rv3664c/dppC | |
| Fe_supp_jason_reseq | -1.163 | 0.0 |
| low_pH_jason_reseq | -0.93 | 1.307 |
| NO_jason_reseq | -1.365 | -1.42 |
| B6_jason_reseq | 0.3 | 0.357 |
| MHCII_jason_reseq | 1.435 | 1.02 |
| Isoniazid02 | -0.681 | -2.206 |
| Rifampicin4 | -0.468 | 0.439 |
| Ethambutol3 | -1.156 | -1.709 |
| Meropenem3 | -1.198 | -1.816 |
| Vancomycin16 | -0.979 | -1.525 |
| Rv2680_day32 | -1.916 | -0.816 |
| H37Rv_KO_MarP | 0.028 | 0.896 |
| hypoxia_3wks | -1.168 | 0.279 |
| hypoxia_6wks | -0.658 | -1.539 |
| glycerol | -1.656 | -0.117 |
| cholesterol | -0.756 | 0.118 |
| AJ | -0.012 | -0.067 |
| Bibs02 | -0.205 | 0.0 |
| Bibs02c | 2.614 | -0.185 |
| BL6 | 0.15 | 0.367 |
| BL6a | 1.538 | 0.0 |
| BXD01 | -0.892 | -1.323 |
| BXD010 | -0.556 | 0.531 |
| BXD011 | -0.698 | -0.576 |
| BXD03 | 0.816 | 0.706 |
| BXD04 | -0.078 | -0.148 |
| BXD05 | -1.149 | -1.094 |
| BXD06 | -0.708 | -0.077 |
| BXD07 | -0.935 | -1.043 |
| BXD08 | -0.02 | -1.255 |
| BXD09 | -0.399 | -0.635 |
| CAST | -0.299 | 0.0 |
| CCcont | -0.254 | -0.276 |
| DS01 | 0.173 | 1.193 |
| DS02 | 1.152 | 1.695 |
| DS04 | 0.16 | 1.934 |
| DS0c | 1.626 | 0.341 |
| GP01 | -0.558 | -1.252 |
| GP02 | -1.87 | -0.785 |
| GP0c | -0.544 | -1.53 |
| NOD | -0.858 | -0.654 |
| NZO | 0.309 | -1.503 |
| PWK | -1.178 | -0.057 |
| H37Rv_KO_CtpC | -0.085 | -0.3 |
| H37Rv_KO_CtpD | -2.74 | -1.109 |
| H37Rv_KO_Rv1272 | 1.292 | -0.411 |
| H37Rv_KO_SugABC | 0.303 | -0.057 |
| H37Rv_KO_MbtN | 1.51 | -0.903 |
| Trans05 | -0.255 | 0.59 |
| macrophage_unactivated | -0.259 | -0.701 |
| IL1 | -0.501 | -0.317 |
| Rapamycin | -1.507 | 0.0 |
| Tcell | 0.414 | 0.326 |
| GMCSF | -0.42 | -0.75 |
| IFNab | 0.804 | -0.323 |
| IFNg | -0.478 | -0.139 |
| IFNg_GMCSF1 | -0.437 | -0.698 |
| Rv1432_day32 | -1.258 | -0.984 |
| Rv1565c_day32 | -0.764 | 0.408 |
| secA2_input | 0.424 | -1.481 |
| delta_Rv3594 | -1.64 | -0.615 |
| delta_Rv3717 | 1.168 | 0.686 |
| delta_Rv3811 | -0.266 | -0.059 |
| delta_Rv0954 | -0.805 | 0.145 |
| PonA1 | 0.649 | -0.792 |
| EccD1_KO | -1.161 | -1.184 |
| EspI_KO | -0.796 | -0.379 |
| PE35_KO | 0.505 | -1.645 |
| PPE68_KO | -0.835 | -1.421 |
| glycerol2 | -0.408 | -0.929 |
| lignocerate | 1.264 | -0.415 |
| oleate | -0.113 | -0.94 |
| phosphatidylcholine | 0.564 | -0.478 |
| acetate | 0.997 | 1.25 |
| glucAc | 1.049 | 0.631 |
| Rv0950ko | 0.223 | 0.0 |
| Rv1096ko | 0.48 | 0.395 |
| Rv3684ko | 0.367 | 0.632 |
| delta_otsA_trehalose | 0.831 | 3.458 |