Top 10 genes with highest correlation to Rv3706c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1200/- | (cc=0.4448) | info on Rv1200/- |
| Rv0847/lpqS | (cc=0.4347) | info on Rv0847/lpqS |
| Rv0488/- | (cc=0.4342) | info on Rv0488/- |
| Rv1232c/- | (cc=0.4146) | info on Rv1232c/- |
| Rv2328/PE23 | (cc=0.4095) | info on Rv2328/PE23 |
| Rv3576/lppH | (cc=0.4068) | info on Rv3576/lppH |
| Rv2550c/vapB20 | (cc=0.3911) | info on Rv2550c/vapB20 |
| Rv3664c/dppC | (cc=0.3851) | info on Rv3664c/dppC |
| Rv0906/- | (cc=0.3746) | info on Rv0906/- |
| Rv2208/cobS | (cc=0.3742) | info on Rv2208/cobS |
Correlation of Rv3706c/- with Rv1200/-
Normalized LFCs for Rv3706c/-:
(description and provenance of datasets)
| Rv3706c/- | Rv1200/- | |
| Fe_supp_jason_reseq | -1.163 | 0.126 |
| low_pH_jason_reseq | -0.93 | -0.236 |
| NO_jason_reseq | -1.365 | 0.097 |
| B6_jason_reseq | 0.3 | 0.573 |
| MHCII_jason_reseq | 1.435 | 1.227 |
| Isoniazid02 | -0.681 | -0.611 |
| Rifampicin4 | -0.468 | -0.233 |
| Ethambutol3 | -1.156 | -0.268 |
| Meropenem3 | -1.198 | -0.289 |
| Vancomycin16 | -0.979 | -0.769 |
| Rv2680_day32 | -1.916 | -0.677 |
| H37Rv_KO_MarP | 0.028 | -0.027 |
| hypoxia_3wks | -1.168 | 0.044 |
| hypoxia_6wks | -0.658 | -0.058 |
| glycerol | -1.656 | -0.383 |
| cholesterol | -0.756 | -0.156 |
| AJ | -0.012 | -0.084 |
| Bibs02 | -0.205 | 0.51 |
| Bibs02c | 2.614 | 0.399 |
| BL6 | 0.15 | 0.419 |
| BL6a | 1.538 | 0.284 |
| BXD01 | -0.892 | 0.021 |
| BXD010 | -0.556 | -0.324 |
| BXD011 | -0.698 | 0.02 |
| BXD03 | 0.816 | 0.093 |
| BXD04 | -0.078 | 0.215 |
| BXD05 | -1.149 | 0.551 |
| BXD06 | -0.708 | -0.075 |
| BXD07 | -0.935 | 0.237 |
| BXD08 | -0.02 | 0.087 |
| BXD09 | -0.399 | -0.109 |
| CAST | -0.299 | 0.167 |
| CCcont | -0.254 | 0.035 |
| DS01 | 0.173 | 0.512 |
| DS02 | 1.152 | 0.436 |
| DS04 | 0.16 | 0.119 |
| DS0c | 1.626 | 0.663 |
| GP01 | -0.558 | -0.574 |
| GP02 | -1.87 | 0.013 |
| GP0c | -0.544 | -0.199 |
| NOD | -0.858 | 0.33 |
| NZO | 0.309 | 0.501 |
| PWK | -1.178 | 0.128 |
| H37Rv_KO_CtpC | -0.085 | -0.293 |
| H37Rv_KO_CtpD | -2.74 | 0.417 |
| H37Rv_KO_Rv1272 | 1.292 | 0.178 |
| H37Rv_KO_SugABC | 0.303 | 0.479 |
| H37Rv_KO_MbtN | 1.51 | 0.779 |
| Trans05 | -0.255 | 0.036 |
| macrophage_unactivated | -0.259 | 0.549 |
| IL1 | -0.501 | 0.018 |
| Rapamycin | -1.507 | -0.052 |
| Tcell | 0.414 | 0.248 |
| GMCSF | -0.42 | 0.42 |
| IFNab | 0.804 | 0.23 |
| IFNg | -0.478 | 0.233 |
| IFNg_GMCSF1 | -0.437 | 0.273 |
| Rv1432_day32 | -1.258 | 0.216 |
| Rv1565c_day32 | -0.764 | 0.174 |
| secA2_input | 0.424 | 0.106 |
| delta_Rv3594 | -1.64 | -0.346 |
| delta_Rv3717 | 1.168 | 0.0 |
| delta_Rv3811 | -0.266 | 0.028 |
| delta_Rv0954 | -0.805 | -0.292 |
| PonA1 | 0.649 | -0.052 |
| EccD1_KO | -1.161 | 0.122 |
| EspI_KO | -0.796 | 0.334 |
| PE35_KO | 0.505 | 0.54 |
| PPE68_KO | -0.835 | 0.739 |
| glycerol2 | -0.408 | 0.853 |
| lignocerate | 1.264 | 0.706 |
| oleate | -0.113 | 0.44 |
| phosphatidylcholine | 0.564 | 0.926 |
| acetate | 0.997 | 0.426 |
| glucAc | 1.049 | 0.731 |
| Rv0950ko | 0.223 | 0.317 |
| Rv1096ko | 0.48 | 0.44 |
| Rv3684ko | 0.367 | 0.57 |
| delta_otsA_trehalose | 0.831 | -0.776 |