Top 10 genes with highest correlation to Rv3706c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1200/- | (cc=0.4448) | info on Rv1200/- |
| Rv0847/lpqS | (cc=0.4347) | info on Rv0847/lpqS |
| Rv0488/- | (cc=0.4342) | info on Rv0488/- |
| Rv1232c/- | (cc=0.4146) | info on Rv1232c/- |
| Rv2328/PE23 | (cc=0.4095) | info on Rv2328/PE23 |
| Rv3576/lppH | (cc=0.4068) | info on Rv3576/lppH |
| Rv2550c/vapB20 | (cc=0.3911) | info on Rv2550c/vapB20 |
| Rv3664c/dppC | (cc=0.3851) | info on Rv3664c/dppC |
| Rv0906/- | (cc=0.3746) | info on Rv0906/- |
| Rv2208/cobS | (cc=0.3742) | info on Rv2208/cobS |
Correlation of Rv3706c/- with Rv2328/PE23
Normalized LFCs for Rv3706c/-:
(description and provenance of datasets)
| Rv3706c/- | Rv2328/PE23 | |
| Fe_supp_jason_reseq | -1.163 | 1.225 |
| low_pH_jason_reseq | -0.93 | -1.477 |
| NO_jason_reseq | -1.365 | -0.942 |
| B6_jason_reseq | 0.3 | 1.473 |
| MHCII_jason_reseq | 1.435 | 0.826 |
| Isoniazid02 | -0.681 | -0.109 |
| Rifampicin4 | -0.468 | -0.203 |
| Ethambutol3 | -1.156 | 0.146 |
| Meropenem3 | -1.198 | -0.199 |
| Vancomycin16 | -0.979 | 0.027 |
| Rv2680_day32 | -1.916 | -0.571 |
| H37Rv_KO_MarP | 0.028 | 1.106 |
| hypoxia_3wks | -1.168 | -0.582 |
| hypoxia_6wks | -0.658 | 0.24 |
| glycerol | -1.656 | -0.209 |
| cholesterol | -0.756 | -0.44 |
| AJ | -0.012 | 0.395 |
| Bibs02 | -0.205 | 0.227 |
| Bibs02c | 2.614 | 0.133 |
| BL6 | 0.15 | -1.094 |
| BL6a | 1.538 | -0.634 |
| BXD01 | -0.892 | -1.325 |
| BXD010 | -0.556 | -0.856 |
| BXD011 | -0.698 | -0.615 |
| BXD03 | 0.816 | -1.361 |
| BXD04 | -0.078 | -0.639 |
| BXD05 | -1.149 | -0.294 |
| BXD06 | -0.708 | -1.069 |
| BXD07 | -0.935 | -0.894 |
| BXD08 | -0.02 | -1.114 |
| BXD09 | -0.399 | -0.688 |
| CAST | -0.299 | -0.302 |
| CCcont | -0.254 | -1.439 |
| DS01 | 0.173 | 0.741 |
| DS02 | 1.152 | 0.78 |
| DS04 | 0.16 | -0.174 |
| DS0c | 1.626 | 0.662 |
| GP01 | -0.558 | -1.656 |
| GP02 | -1.87 | -1.829 |
| GP0c | -0.544 | -1.536 |
| NOD | -0.858 | -0.526 |
| NZO | 0.309 | -0.101 |
| PWK | -1.178 | -0.033 |
| H37Rv_KO_CtpC | -0.085 | -0.952 |
| H37Rv_KO_CtpD | -2.74 | -2.587 |
| H37Rv_KO_Rv1272 | 1.292 | -1.596 |
| H37Rv_KO_SugABC | 0.303 | -1.074 |
| H37Rv_KO_MbtN | 1.51 | 0.912 |
| Trans05 | -0.255 | -1.001 |
| macrophage_unactivated | -0.259 | -0.748 |
| IL1 | -0.501 | -0.919 |
| Rapamycin | -1.507 | -1.43 |
| Tcell | 0.414 | -1.427 |
| GMCSF | -0.42 | -0.657 |
| IFNab | 0.804 | -0.278 |
| IFNg | -0.478 | -1.318 |
| IFNg_GMCSF1 | -0.437 | 0.905 |
| Rv1432_day32 | -1.258 | -1.593 |
| Rv1565c_day32 | -0.764 | -0.333 |
| secA2_input | 0.424 | 0.672 |
| delta_Rv3594 | -1.64 | 0.252 |
| delta_Rv3717 | 1.168 | 0.843 |
| delta_Rv3811 | -0.266 | 0.593 |
| delta_Rv0954 | -0.805 | 0.163 |
| PonA1 | 0.649 | 1.18 |
| EccD1_KO | -1.161 | -0.641 |
| EspI_KO | -0.796 | 0.396 |
| PE35_KO | 0.505 | 0.356 |
| PPE68_KO | -0.835 | -0.691 |
| glycerol2 | -0.408 | 0.094 |
| lignocerate | 1.264 | 0.442 |
| oleate | -0.113 | -0.286 |
| phosphatidylcholine | 0.564 | 0.048 |
| acetate | 0.997 | 0.914 |
| glucAc | 1.049 | 0.592 |
| Rv0950ko | 0.223 | 0.938 |
| Rv1096ko | 0.48 | -0.718 |
| Rv3684ko | 0.367 | 0.563 |
| delta_otsA_trehalose | 0.831 | -0.449 |