Top 10 genes with highest correlation to Rv3666c/dppA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3848/- | (cc=0.5065) | info on Rv3848/- |
| Rv2928/tesA | (cc=0.5054) | info on Rv2928/tesA |
| Rv0487/- | (cc=0.4997) | info on Rv0487/- |
| Rv1809/PPE33 | (cc=0.4651) | info on Rv1809/PPE33 |
| Rv2386c/mbtI | (cc=0.4629) | info on Rv2386c/mbtI |
| Rv2840c/- | (cc=0.4625) | info on Rv2840c/- |
| Rv2453c/mobA | (cc=0.4499) | info on Rv2453c/mobA |
| Rv1285/cysD | (cc=0.4493) | info on Rv1285/cysD |
| Rv2384/mbtA | (cc=0.4397) | info on Rv2384/mbtA |
| Rv2640c/- | (cc=0.4309) | info on Rv2640c/- |
Correlation of Rv3666c/dppA with Rv3848/-
Normalized LFCs for Rv3666c/dppA:
(description and provenance of datasets)
| Rv3666c/dppA | Rv3848/- | |
| Fe_supp_jason_reseq | -0.234 | 1.149 |
| low_pH_jason_reseq | 2.946 | 1.074 |
| NO_jason_reseq | -0.822 | -6.0 |
| B6_jason_reseq | -1.61 | -5.365 |
| MHCII_jason_reseq | -1.855 | -4.86 |
| Isoniazid02 | -0.247 | 1.908 |
| Rifampicin4 | -0.146 | -0.585 |
| Ethambutol3 | -0.066 | 0.185 |
| Meropenem3 | 0.182 | -1.76 |
| Vancomycin16 | 0.0 | -3.104 |
| Rv2680_day32 | -0.898 | -1.454 |
| H37Rv_KO_MarP | 1.01 | -0.684 |
| hypoxia_3wks | 0.255 | -3.019 |
| hypoxia_6wks | -0.606 | -1.1 |
| glycerol | -0.108 | 0.705 |
| cholesterol | 1.357 | -0.672 |
| AJ | -0.255 | -2.131 |
| Bibs02 | -0.201 | -3.187 |
| Bibs02c | 1.094 | -0.846 |
| BL6 | 0.392 | -0.744 |
| BL6a | 0.839 | -0.86 |
| BXD01 | 0.458 | -0.918 |
| BXD010 | -0.069 | -1.522 |
| BXD011 | 0.186 | -1.297 |
| BXD03 | 0.0 | 0.373 |
| BXD04 | 0.124 | -0.397 |
| BXD05 | 0.616 | -1.302 |
| BXD06 | 0.656 | 0.447 |
| BXD07 | 0.203 | -1.41 |
| BXD08 | 0.0 | -1.665 |
| BXD09 | 0.328 | -1.67 |
| CAST | 0.632 | 2.983 |
| CCcont | 1.266 | 2.663 |
| DS01 | 1.235 | 0.857 |
| DS02 | 0.922 | -1.897 |
| DS04 | 1.733 | -0.038 |
| DS0c | -0.506 | -1.992 |
| GP01 | -0.715 | -1.721 |
| GP02 | -0.52 | -1.45 |
| GP0c | -0.942 | -2.266 |
| NOD | 0.789 | 1.583 |
| NZO | -0.6 | -1.832 |
| PWK | 0.374 | -0.429 |
| H37Rv_KO_CtpC | 0.379 | 0.973 |
| H37Rv_KO_CtpD | 0.241 | 0.773 |
| H37Rv_KO_Rv1272 | 0.738 | -1.049 |
| H37Rv_KO_SugABC | -0.446 | -0.661 |
| H37Rv_KO_MbtN | -0.55 | -0.129 |
| Trans05 | 0.876 | 0.933 |
| macrophage_unactivated | 0.915 | 0.164 |
| IL1 | 0.59 | -2.515 |
| Rapamycin | 0.316 | -1.329 |
| Tcell | 1.085 | 0.495 |
| GMCSF | 0.137 | -0.449 |
| IFNab | -0.336 | 1.255 |
| IFNg | 0.275 | -3.127 |
| IFNg_GMCSF1 | 1.668 | -1.593 |
| Rv1432_day32 | 0.0 | -3.388 |
| Rv1565c_day32 | -0.725 | -0.218 |
| secA2_input | 0.504 | 1.819 |
| delta_Rv3594 | -0.788 | -1.911 |
| delta_Rv3717 | -0.927 | -2.991 |
| delta_Rv3811 | -0.766 | -2.098 |
| delta_Rv0954 | 0.178 | -1.477 |
| PonA1 | 0.159 | -0.165 |
| EccD1_KO | 1.365 | -1.615 |
| EspI_KO | 0.779 | -0.878 |
| PE35_KO | 1.587 | 0.0 |
| PPE68_KO | 1.181 | 0.886 |
| glycerol2 | 0.708 | -0.028 |
| lignocerate | 0.615 | -2.365 |
| oleate | -0.44 | -2.753 |
| phosphatidylcholine | 0.84 | -0.331 |
| acetate | 0.612 | 0.529 |
| glucAc | 0.453 | 0.262 |
| Rv0950ko | -1.007 | 0.0 |
| Rv1096ko | -0.311 | -3.553 |
| Rv3684ko | -1.755 | -2.581 |
| delta_otsA_trehalose | 2.069 | 1.01 |