Top 10 genes with highest correlation to Rv3657c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2656c/- | (cc=0.47) | info on Rv2656c/- |
| Rv2401/- | (cc=0.4504) | info on Rv2401/- |
| Rv2398c/cysW | (cc=0.4275) | info on Rv2398c/cysW |
| Rv0805/- | (cc=0.418) | info on Rv0805/- |
| Rv2512c/- | (cc=0.4095) | info on Rv2512c/- |
| Rv1199c/- | (cc=0.4086) | info on Rv1199c/- |
| Rv2840c/- | (cc=0.4084) | info on Rv2840c/- |
| Rv2335/cysE | (cc=0.4) | info on Rv2335/cysE |
| Rv3527/- | (cc=0.3993) | info on Rv3527/- |
| Rv2793c/truB | (cc=0.3839) | info on Rv2793c/truB |
Correlation of Rv3657c/- with Rv2401/-
Normalized LFCs for Rv3657c/-:
(description and provenance of datasets)
| Rv3657c/- | Rv2401/- | |
| Fe_supp_jason_reseq | -0.878 | 1.001 |
| low_pH_jason_reseq | 1.745 | 1.261 |
| NO_jason_reseq | -1.244 | 2.079 |
| B6_jason_reseq | -0.317 | 2.108 |
| MHCII_jason_reseq | -0.503 | -2.11 |
| Isoniazid02 | 0.0 | -0.258 |
| Rifampicin4 | 0.382 | -0.742 |
| Ethambutol3 | 0.86 | -0.597 |
| Meropenem3 | 0.345 | -0.588 |
| Vancomycin16 | 0.218 | -0.554 |
| Rv2680_day32 | 0.821 | 0.995 |
| H37Rv_KO_MarP | 0.471 | 0.267 |
| hypoxia_3wks | 0.0 | -0.486 |
| hypoxia_6wks | -0.332 | 2.397 |
| glycerol | 1.752 | 0.341 |
| cholesterol | 0.859 | 0.454 |
| AJ | -0.146 | 0.392 |
| Bibs02 | -1.325 | 0.677 |
| Bibs02c | 0.0 | -0.355 |
| BL6 | -1.07 | -0.723 |
| BL6a | 0.284 | 0.29 |
| BXD01 | -0.264 | -0.347 |
| BXD010 | 1.332 | 0.543 |
| BXD011 | -0.123 | 0.583 |
| BXD03 | 1.226 | -0.229 |
| BXD04 | 0.933 | 0.627 |
| BXD05 | 1.055 | -0.405 |
| BXD06 | 0.422 | 0.068 |
| BXD07 | 1.065 | 1.803 |
| BXD08 | 0.358 | -0.225 |
| BXD09 | 0.733 | 1.39 |
| CAST | 0.976 | 1.952 |
| CCcont | -1.278 | 0.149 |
| DS01 | 0.799 | 2.452 |
| DS02 | 1.972 | 3.341 |
| DS04 | 1.012 | 0.645 |
| DS0c | 0.479 | 2.528 |
| GP01 | -1.164 | -1.012 |
| GP02 | -1.064 | 0.0 |
| GP0c | -0.082 | 0.357 |
| NOD | 0.0 | 0.059 |
| NZO | 0.63 | 0.423 |
| PWK | 0.706 | 1.368 |
| H37Rv_KO_CtpC | -0.213 | 0.082 |
| H37Rv_KO_CtpD | 0.0 | 1.059 |
| H37Rv_KO_Rv1272 | 1.146 | -0.95 |
| H37Rv_KO_SugABC | 0.03 | 0.385 |
| H37Rv_KO_MbtN | -0.747 | -0.921 |
| Trans05 | 0.752 | -1.434 |
| macrophage_unactivated | -1.051 | -1.228 |
| IL1 | -0.608 | 0.077 |
| Rapamycin | -0.555 | 0.236 |
| Tcell | -0.358 | 0.857 |
| GMCSF | 0.217 | -0.85 |
| IFNab | 0.816 | -0.417 |
| IFNg | -0.294 | 0.644 |
| IFNg_GMCSF1 | -0.204 | -3.224 |
| Rv1432_day32 | 0.0 | 1.352 |
| Rv1565c_day32 | -0.58 | 0.736 |
| secA2_input | 1.171 | 0.099 |
| delta_Rv3594 | -0.954 | -1.479 |
| delta_Rv3717 | -0.101 | -2.246 |
| delta_Rv3811 | -1.115 | -1.862 |
| delta_Rv0954 | -1.622 | -2.076 |
| PonA1 | 0.088 | -0.091 |
| EccD1_KO | 0.365 | 0.901 |
| EspI_KO | -0.083 | -0.097 |
| PE35_KO | 0.085 | 2.818 |
| PPE68_KO | 2.054 | 2.048 |
| glycerol2 | -1.188 | -2.474 |
| lignocerate | -0.442 | -1.689 |
| oleate | -1.007 | -2.504 |
| phosphatidylcholine | -0.819 | -2.473 |
| acetate | 0.788 | -0.465 |
| glucAc | -0.877 | -0.187 |
| Rv0950ko | -0.193 | -1.517 |
| Rv1096ko | -0.947 | -1.034 |
| Rv3684ko | -1.428 | -3.331 |
| delta_otsA_trehalose | 0.214 | -0.864 |