Top 10 genes with highest correlation to Rv3655c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1318c/- | (cc=0.6782) | info on Rv1318c/- |
| Rv2484c/- | (cc=0.6279) | info on Rv2484c/- |
| Rv0447c/ufaA1 | (cc=0.6047) | info on Rv0447c/ufaA1 |
| Rv0233/nrdB | (cc=0.5929) | info on Rv0233/nrdB |
| Rv1736c/narX | (cc=0.5444) | info on Rv1736c/narX |
| Rv2254c/- | (cc=0.5428) | info on Rv2254c/- |
| Rv2771c/- | (cc=0.5415) | info on Rv2771c/- |
| Rv2860c/glnA4 | (cc=0.5328) | info on Rv2860c/glnA4 |
| Rv1040c/PE8 | (cc=0.5327) | info on Rv1040c/PE8 |
| Rv0597c/- | (cc=0.5255) | info on Rv0597c/- |
Correlation of Rv3655c/- with Rv2860c/glnA4
Normalized LFCs for Rv3655c/-:
(description and provenance of datasets)
| Rv3655c/- | Rv2860c/glnA4 | |
| Fe_supp_jason_reseq | 0.425 | 0.272 |
| low_pH_jason_reseq | -1.049 | 0.348 |
| NO_jason_reseq | -0.604 | -0.163 |
| B6_jason_reseq | 1.205 | 1.016 |
| MHCII_jason_reseq | 2.276 | 1.38 |
| Isoniazid02 | 0.335 | 0.528 |
| Rifampicin4 | 0.382 | -0.206 |
| Ethambutol3 | 5.673 | 2.104 |
| Meropenem3 | 0.092 | 0.435 |
| Vancomycin16 | 0.061 | 0.443 |
| Rv2680_day32 | -1.416 | 0.795 |
| H37Rv_KO_MarP | -0.591 | -0.167 |
| hypoxia_3wks | -1.033 | -0.144 |
| hypoxia_6wks | -0.804 | -0.205 |
| glycerol | -0.284 | 0.878 |
| cholesterol | -0.588 | 0.406 |
| AJ | 0.407 | 0.457 |
| Bibs02 | 1.009 | -0.015 |
| Bibs02c | 1.447 | -0.033 |
| BL6 | -3.974 | -0.438 |
| BL6a | -0.238 | -0.29 |
| BXD01 | -1.472 | 0.13 |
| BXD010 | -1.256 | -0.299 |
| BXD011 | -0.233 | -0.01 |
| BXD03 | -0.862 | 0.183 |
| BXD04 | -1.781 | -0.216 |
| BXD05 | -0.792 | 0.309 |
| BXD06 | -1.621 | -0.124 |
| BXD07 | -0.906 | -0.057 |
| BXD08 | -1.735 | 0.152 |
| BXD09 | -0.956 | -0.299 |
| CAST | -0.36 | 0.279 |
| CCcont | -3.528 | -0.379 |
| DS01 | 1.646 | 1.027 |
| DS02 | 1.742 | 0.61 |
| DS04 | 0.625 | 0.904 |
| DS0c | 1.009 | 1.193 |
| GP01 | -1.353 | -0.906 |
| GP02 | -1.112 | 0.944 |
| GP0c | -2.31 | -0.984 |
| NOD | -0.316 | -0.308 |
| NZO | 0.036 | 0.535 |
| PWK | 0.753 | 0.689 |
| H37Rv_KO_CtpC | -1.221 | -0.804 |
| H37Rv_KO_CtpD | 0.864 | -1.941 |
| H37Rv_KO_Rv1272 | -0.353 | 0.109 |
| H37Rv_KO_SugABC | -1.391 | -0.325 |
| H37Rv_KO_MbtN | -1.688 | -0.907 |
| Trans05 | -0.935 | 0.292 |
| macrophage_unactivated | -0.451 | 0.679 |
| IL1 | -1.258 | 0.383 |
| Rapamycin | -1.415 | 0.147 |
| Tcell | -0.821 | -0.459 |
| GMCSF | -0.539 | 0.28 |
| IFNab | -0.254 | 0.036 |
| IFNg | -0.762 | -0.235 |
| IFNg_GMCSF1 | 0.487 | 0.151 |
| Rv1432_day32 | 0.484 | 0.738 |
| Rv1565c_day32 | -0.122 | -0.3 |
| secA2_input | 0.999 | 0.715 |
| delta_Rv3594 | 0.08 | 0.142 |
| delta_Rv3717 | -0.405 | 0.117 |
| delta_Rv3811 | -0.033 | -0.274 |
| delta_Rv0954 | -0.114 | -0.578 |
| PonA1 | -2.026 | 0.358 |
| EccD1_KO | 0.0 | 0.441 |
| EspI_KO | -1.252 | 0.168 |
| PE35_KO | 0.315 | 0.598 |
| PPE68_KO | 0.406 | 0.429 |
| glycerol2 | -1.739 | 0.158 |
| lignocerate | -1.913 | 0.138 |
| oleate | -0.413 | 0.73 |
| phosphatidylcholine | -1.48 | 0.556 |
| acetate | -0.916 | -0.1 |
| glucAc | -2.888 | -0.079 |
| Rv0950ko | 2.234 | 0.425 |
| Rv1096ko | 2.702 | 0.621 |
| Rv3684ko | 2.869 | 0.622 |
| delta_otsA_trehalose | -0.27 | 0.045 |