Top 10 genes with highest correlation to Rv3655c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1318c/- | (cc=0.6782) | info on Rv1318c/- |
| Rv2484c/- | (cc=0.6279) | info on Rv2484c/- |
| Rv0447c/ufaA1 | (cc=0.6047) | info on Rv0447c/ufaA1 |
| Rv0233/nrdB | (cc=0.5929) | info on Rv0233/nrdB |
| Rv1736c/narX | (cc=0.5444) | info on Rv1736c/narX |
| Rv2254c/- | (cc=0.5428) | info on Rv2254c/- |
| Rv2771c/- | (cc=0.5415) | info on Rv2771c/- |
| Rv2860c/glnA4 | (cc=0.5328) | info on Rv2860c/glnA4 |
| Rv1040c/PE8 | (cc=0.5327) | info on Rv1040c/PE8 |
| Rv0597c/- | (cc=0.5255) | info on Rv0597c/- |
Correlation of Rv3655c/- with Rv0233/nrdB
Normalized LFCs for Rv3655c/-:
(description and provenance of datasets)
| Rv3655c/- | Rv0233/nrdB | |
| Fe_supp_jason_reseq | 0.425 | 0.2 |
| low_pH_jason_reseq | -1.049 | -0.095 |
| NO_jason_reseq | -0.604 | -0.131 |
| B6_jason_reseq | 1.205 | 0.854 |
| MHCII_jason_reseq | 2.276 | 1.421 |
| Isoniazid02 | 0.335 | 0.322 |
| Rifampicin4 | 0.382 | -0.192 |
| Ethambutol3 | 5.673 | 0.154 |
| Meropenem3 | 0.092 | 0.291 |
| Vancomycin16 | 0.061 | -0.443 |
| Rv2680_day32 | -1.416 | 0.614 |
| H37Rv_KO_MarP | -0.591 | 0.167 |
| hypoxia_3wks | -1.033 | -0.159 |
| hypoxia_6wks | -0.804 | 0.192 |
| glycerol | -0.284 | -0.973 |
| cholesterol | -0.588 | -0.39 |
| AJ | 0.407 | 0.316 |
| Bibs02 | 1.009 | 0.891 |
| Bibs02c | 1.447 | 0.543 |
| BL6 | -3.974 | -1.416 |
| BL6a | -0.238 | -0.575 |
| BXD01 | -1.472 | -0.696 |
| BXD010 | -1.256 | -0.537 |
| BXD011 | -0.233 | -0.693 |
| BXD03 | -0.862 | -1.509 |
| BXD04 | -1.781 | -0.539 |
| BXD05 | -0.792 | -0.41 |
| BXD06 | -1.621 | -0.887 |
| BXD07 | -0.906 | -1.157 |
| BXD08 | -1.735 | -0.354 |
| BXD09 | -0.956 | -0.919 |
| CAST | -0.36 | -0.038 |
| CCcont | -3.528 | -1.564 |
| DS01 | 1.646 | 1.025 |
| DS02 | 1.742 | 0.748 |
| DS04 | 0.625 | 0.933 |
| DS0c | 1.009 | 0.548 |
| GP01 | -1.353 | -0.911 |
| GP02 | -1.112 | -0.359 |
| GP0c | -2.31 | -0.382 |
| NOD | -0.316 | 0.605 |
| NZO | 0.036 | 0.12 |
| PWK | 0.753 | -0.242 |
| H37Rv_KO_CtpC | -1.221 | -1.19 |
| H37Rv_KO_CtpD | 0.864 | -0.803 |
| H37Rv_KO_Rv1272 | -0.353 | -0.626 |
| H37Rv_KO_SugABC | -1.391 | -0.316 |
| H37Rv_KO_MbtN | -1.688 | -0.755 |
| Trans05 | -0.935 | -0.13 |
| macrophage_unactivated | -0.451 | -1.083 |
| IL1 | -1.258 | -0.193 |
| Rapamycin | -1.415 | -0.786 |
| Tcell | -0.821 | -0.046 |
| GMCSF | -0.539 | 0.459 |
| IFNab | -0.254 | -0.478 |
| IFNg | -0.762 | 0.38 |
| IFNg_GMCSF1 | 0.487 | -0.396 |
| Rv1432_day32 | 0.484 | 0.042 |
| Rv1565c_day32 | -0.122 | 0.963 |
| secA2_input | 0.999 | 0.106 |
| delta_Rv3594 | 0.08 | -0.399 |
| delta_Rv3717 | -0.405 | -0.766 |
| delta_Rv3811 | -0.033 | -0.589 |
| delta_Rv0954 | -0.114 | -0.252 |
| PonA1 | -2.026 | -0.066 |
| EccD1_KO | 0.0 | -0.286 |
| EspI_KO | -1.252 | -0.368 |
| PE35_KO | 0.315 | -1.041 |
| PPE68_KO | 0.406 | -0.483 |
| glycerol2 | -1.739 | -0.911 |
| lignocerate | -1.913 | -0.609 |
| oleate | -0.413 | -0.404 |
| phosphatidylcholine | -1.48 | -0.598 |
| acetate | -0.916 | -1.107 |
| glucAc | -2.888 | -1.029 |
| Rv0950ko | 2.234 | 0.308 |
| Rv1096ko | 2.702 | 0.805 |
| Rv3684ko | 2.869 | 0.259 |
| delta_otsA_trehalose | -0.27 | 0.437 |