Top 10 genes with highest correlation to Rv3655c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1318c/- | (cc=0.6782) | info on Rv1318c/- |
| Rv2484c/- | (cc=0.6279) | info on Rv2484c/- |
| Rv0447c/ufaA1 | (cc=0.6047) | info on Rv0447c/ufaA1 |
| Rv0233/nrdB | (cc=0.5929) | info on Rv0233/nrdB |
| Rv1736c/narX | (cc=0.5444) | info on Rv1736c/narX |
| Rv2254c/- | (cc=0.5428) | info on Rv2254c/- |
| Rv2771c/- | (cc=0.5415) | info on Rv2771c/- |
| Rv2860c/glnA4 | (cc=0.5328) | info on Rv2860c/glnA4 |
| Rv1040c/PE8 | (cc=0.5327) | info on Rv1040c/PE8 |
| Rv0597c/- | (cc=0.5255) | info on Rv0597c/- |
Correlation of Rv3655c/- with Rv1040c/PE8
Normalized LFCs for Rv3655c/-:
(description and provenance of datasets)
| Rv3655c/- | Rv1040c/PE8 | |
| Fe_supp_jason_reseq | 0.425 | -0.418 |
| low_pH_jason_reseq | -1.049 | -1.323 |
| NO_jason_reseq | -0.604 | -0.995 |
| B6_jason_reseq | 1.205 | -0.239 |
| MHCII_jason_reseq | 2.276 | 0.017 |
| Isoniazid02 | 0.335 | 1.368 |
| Rifampicin4 | 0.382 | 0.0 |
| Ethambutol3 | 5.673 | 2.203 |
| Meropenem3 | 0.092 | 0.519 |
| Vancomycin16 | 0.061 | -0.225 |
| Rv2680_day32 | -1.416 | -1.362 |
| H37Rv_KO_MarP | -0.591 | 0.178 |
| hypoxia_3wks | -1.033 | -0.108 |
| hypoxia_6wks | -0.804 | -0.434 |
| glycerol | -0.284 | -0.377 |
| cholesterol | -0.588 | -0.641 |
| AJ | 0.407 | 0.773 |
| Bibs02 | 1.009 | 0.31 |
| Bibs02c | 1.447 | 0.882 |
| BL6 | -3.974 | -1.159 |
| BL6a | -0.238 | 0.768 |
| BXD01 | -1.472 | -0.214 |
| BXD010 | -1.256 | -0.067 |
| BXD011 | -0.233 | -0.328 |
| BXD03 | -0.862 | -0.722 |
| BXD04 | -1.781 | -0.15 |
| BXD05 | -0.792 | -0.57 |
| BXD06 | -1.621 | -0.504 |
| BXD07 | -0.906 | -0.312 |
| BXD08 | -1.735 | -0.478 |
| BXD09 | -0.956 | 0.044 |
| CAST | -0.36 | 0.365 |
| CCcont | -3.528 | -0.661 |
| DS01 | 1.646 | 0.173 |
| DS02 | 1.742 | 0.38 |
| DS04 | 0.625 | -0.564 |
| DS0c | 1.009 | 0.234 |
| GP01 | -1.353 | 0.084 |
| GP02 | -1.112 | -0.734 |
| GP0c | -2.31 | 0.469 |
| NOD | -0.316 | 0.332 |
| NZO | 0.036 | -0.283 |
| PWK | 0.753 | 0.267 |
| H37Rv_KO_CtpC | -1.221 | -0.267 |
| H37Rv_KO_CtpD | 0.864 | 0.813 |
| H37Rv_KO_Rv1272 | -0.353 | 0.939 |
| H37Rv_KO_SugABC | -1.391 | 0.101 |
| H37Rv_KO_MbtN | -1.688 | -1.64 |
| Trans05 | -0.935 | -0.423 |
| macrophage_unactivated | -0.451 | 0.568 |
| IL1 | -1.258 | -1.014 |
| Rapamycin | -1.415 | 0.583 |
| Tcell | -0.821 | -0.111 |
| GMCSF | -0.539 | -0.409 |
| IFNab | -0.254 | 0.36 |
| IFNg | -0.762 | -0.184 |
| IFNg_GMCSF1 | 0.487 | 0.405 |
| Rv1432_day32 | 0.484 | 0.095 |
| Rv1565c_day32 | -0.122 | 0.588 |
| secA2_input | 0.999 | 1.41 |
| delta_Rv3594 | 0.08 | 0.262 |
| delta_Rv3717 | -0.405 | 0.419 |
| delta_Rv3811 | -0.033 | -0.306 |
| delta_Rv0954 | -0.114 | -0.114 |
| PonA1 | -2.026 | 0.743 |
| EccD1_KO | 0.0 | 1.612 |
| EspI_KO | -1.252 | 0.844 |
| PE35_KO | 0.315 | 0.032 |
| PPE68_KO | 0.406 | 0.544 |
| glycerol2 | -1.739 | 0.489 |
| lignocerate | -1.913 | 0.196 |
| oleate | -0.413 | 0.464 |
| phosphatidylcholine | -1.48 | 0.576 |
| acetate | -0.916 | -0.352 |
| glucAc | -2.888 | -0.451 |
| Rv0950ko | 2.234 | 0.1 |
| Rv1096ko | 2.702 | 1.056 |
| Rv3684ko | 2.869 | 1.176 |
| delta_otsA_trehalose | -0.27 | -0.534 |