Top 10 genes with highest correlation to Rv3638/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1989c/- | (cc=0.5864) | info on Rv1989c/- |
| Rv1374c/- | (cc=0.5662) | info on Rv1374c/- |
| Rv0849/- | (cc=0.55) | info on Rv0849/- |
| Rv1843c/guaB1 | (cc=0.5423) | info on Rv1843c/guaB1 |
| Rv2081c/- | (cc=0.5422) | info on Rv2081c/- |
| Rv1735c/- | (cc=0.5413) | info on Rv1735c/- |
| Rv0233/nrdB | (cc=0.5381) | info on Rv0233/nrdB |
| Rv1734c/- | (cc=0.5265) | info on Rv1734c/- |
| Rv0764c/cyp51 | (cc=0.524) | info on Rv0764c/cyp51 |
| Rv0846c/- | (cc=0.5185) | info on Rv0846c/- |
Correlation of Rv3638/- with Rv1735c/-
Normalized LFCs for Rv3638/-:
(description and provenance of datasets)
| Rv3638/- | Rv1735c/- | |
| Fe_supp_jason_reseq | 0.081 | -1.307 |
| low_pH_jason_reseq | -0.144 | -0.656 |
| NO_jason_reseq | -0.139 | 0.118 |
| B6_jason_reseq | 0.405 | -1.084 |
| MHCII_jason_reseq | 0.936 | 0.265 |
| Isoniazid02 | -0.124 | 1.275 |
| Rifampicin4 | -0.585 | 0.501 |
| Ethambutol3 | -0.28 | 0.916 |
| Meropenem3 | -0.087 | 0.264 |
| Vancomycin16 | -0.096 | 0.716 |
| Rv2680_day32 | 1.23 | 0.0 |
| H37Rv_KO_MarP | 0.8 | 0.559 |
| hypoxia_3wks | -0.04 | 0.578 |
| hypoxia_6wks | 0.297 | -1.825 |
| glycerol | -3.169 | -1.444 |
| cholesterol | -1.042 | -1.572 |
| AJ | 0.037 | 0.104 |
| Bibs02 | 0.115 | -0.66 |
| Bibs02c | 0.045 | -0.571 |
| BL6 | -1.463 | -2.2 |
| BL6a | -0.251 | -2.426 |
| BXD01 | -0.507 | -1.284 |
| BXD010 | -1.283 | -2.074 |
| BXD011 | -0.76 | -1.905 |
| BXD03 | -0.637 | -1.656 |
| BXD04 | 0.181 | 0.0 |
| BXD05 | -0.669 | -1.264 |
| BXD06 | -0.399 | -2.221 |
| BXD07 | -0.507 | -2.304 |
| BXD08 | -0.72 | -0.976 |
| BXD09 | -0.514 | -1.64 |
| CAST | -0.377 | 0.337 |
| CCcont | -1.698 | -2.554 |
| DS01 | 0.243 | -0.703 |
| DS02 | 0.339 | 0.928 |
| DS04 | 0.55 | 1.665 |
| DS0c | 0.192 | -0.102 |
| GP01 | 0.797 | 1.249 |
| GP02 | -0.644 | 1.619 |
| GP0c | 0.062 | -0.126 |
| NOD | 0.153 | 0.347 |
| NZO | 0.374 | -1.319 |
| PWK | -0.121 | 0.688 |
| H37Rv_KO_CtpC | -0.632 | 0.623 |
| H37Rv_KO_CtpD | 0.04 | -1.945 |
| H37Rv_KO_Rv1272 | -0.187 | 0.834 |
| H37Rv_KO_SugABC | 0.418 | -0.844 |
| H37Rv_KO_MbtN | 0.044 | -1.715 |
| Trans05 | -0.335 | -0.114 |
| macrophage_unactivated | -1.297 | -2.273 |
| IL1 | -1.219 | -3.283 |
| Rapamycin | -1.016 | -3.069 |
| Tcell | -1.131 | -2.076 |
| GMCSF | -1.127 | -2.778 |
| IFNab | -1.001 | -3.694 |
| IFNg | -0.804 | -2.536 |
| IFNg_GMCSF1 | -0.446 | -2.13 |
| Rv1432_day32 | -0.789 | 0.0 |
| Rv1565c_day32 | 1.17 | 1.238 |
| secA2_input | -0.778 | -0.429 |
| delta_Rv3594 | -0.014 | -0.832 |
| delta_Rv3717 | -0.648 | 0.165 |
| delta_Rv3811 | -0.581 | -0.61 |
| delta_Rv0954 | 0.35 | -1.499 |
| PonA1 | 0.178 | 0.092 |
| EccD1_KO | -0.362 | 0.793 |
| EspI_KO | -0.371 | -0.394 |
| PE35_KO | 0.076 | 0.435 |
| PPE68_KO | 0.432 | 1.901 |
| glycerol2 | 0.015 | -0.787 |
| lignocerate | -0.627 | -1.162 |
| oleate | 0.092 | -0.32 |
| phosphatidylcholine | 0.207 | -0.56 |
| acetate | -0.559 | -1.993 |
| glucAc | -0.881 | -2.721 |
| Rv0950ko | -0.054 | 1.001 |
| Rv1096ko | 0.443 | 1.454 |
| Rv3684ko | -0.308 | 1.15 |
| delta_otsA_trehalose | 0.021 | 0.564 |