Top 10 genes with highest correlation to Rv3638/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1989c/- | (cc=0.5864) | info on Rv1989c/- |
| Rv1374c/- | (cc=0.5662) | info on Rv1374c/- |
| Rv0849/- | (cc=0.55) | info on Rv0849/- |
| Rv1843c/guaB1 | (cc=0.5423) | info on Rv1843c/guaB1 |
| Rv2081c/- | (cc=0.5422) | info on Rv2081c/- |
| Rv1735c/- | (cc=0.5413) | info on Rv1735c/- |
| Rv0233/nrdB | (cc=0.5381) | info on Rv0233/nrdB |
| Rv1734c/- | (cc=0.5265) | info on Rv1734c/- |
| Rv0764c/cyp51 | (cc=0.524) | info on Rv0764c/cyp51 |
| Rv0846c/- | (cc=0.5185) | info on Rv0846c/- |
Correlation of Rv3638/- with Rv0233/nrdB
Normalized LFCs for Rv3638/-:
(description and provenance of datasets)
| Rv3638/- | Rv0233/nrdB | |
| Fe_supp_jason_reseq | 0.081 | 0.2 |
| low_pH_jason_reseq | -0.144 | -0.095 |
| NO_jason_reseq | -0.139 | -0.131 |
| B6_jason_reseq | 0.405 | 0.854 |
| MHCII_jason_reseq | 0.936 | 1.421 |
| Isoniazid02 | -0.124 | 0.322 |
| Rifampicin4 | -0.585 | -0.192 |
| Ethambutol3 | -0.28 | 0.154 |
| Meropenem3 | -0.087 | 0.291 |
| Vancomycin16 | -0.096 | -0.443 |
| Rv2680_day32 | 1.23 | 0.614 |
| H37Rv_KO_MarP | 0.8 | 0.167 |
| hypoxia_3wks | -0.04 | -0.159 |
| hypoxia_6wks | 0.297 | 0.192 |
| glycerol | -3.169 | -0.973 |
| cholesterol | -1.042 | -0.39 |
| AJ | 0.037 | 0.316 |
| Bibs02 | 0.115 | 0.891 |
| Bibs02c | 0.045 | 0.543 |
| BL6 | -1.463 | -1.416 |
| BL6a | -0.251 | -0.575 |
| BXD01 | -0.507 | -0.696 |
| BXD010 | -1.283 | -0.537 |
| BXD011 | -0.76 | -0.693 |
| BXD03 | -0.637 | -1.509 |
| BXD04 | 0.181 | -0.539 |
| BXD05 | -0.669 | -0.41 |
| BXD06 | -0.399 | -0.887 |
| BXD07 | -0.507 | -1.157 |
| BXD08 | -0.72 | -0.354 |
| BXD09 | -0.514 | -0.919 |
| CAST | -0.377 | -0.038 |
| CCcont | -1.698 | -1.564 |
| DS01 | 0.243 | 1.025 |
| DS02 | 0.339 | 0.748 |
| DS04 | 0.55 | 0.933 |
| DS0c | 0.192 | 0.548 |
| GP01 | 0.797 | -0.911 |
| GP02 | -0.644 | -0.359 |
| GP0c | 0.062 | -0.382 |
| NOD | 0.153 | 0.605 |
| NZO | 0.374 | 0.12 |
| PWK | -0.121 | -0.242 |
| H37Rv_KO_CtpC | -0.632 | -1.19 |
| H37Rv_KO_CtpD | 0.04 | -0.803 |
| H37Rv_KO_Rv1272 | -0.187 | -0.626 |
| H37Rv_KO_SugABC | 0.418 | -0.316 |
| H37Rv_KO_MbtN | 0.044 | -0.755 |
| Trans05 | -0.335 | -0.13 |
| macrophage_unactivated | -1.297 | -1.083 |
| IL1 | -1.219 | -0.193 |
| Rapamycin | -1.016 | -0.786 |
| Tcell | -1.131 | -0.046 |
| GMCSF | -1.127 | 0.459 |
| IFNab | -1.001 | -0.478 |
| IFNg | -0.804 | 0.38 |
| IFNg_GMCSF1 | -0.446 | -0.396 |
| Rv1432_day32 | -0.789 | 0.042 |
| Rv1565c_day32 | 1.17 | 0.963 |
| secA2_input | -0.778 | 0.106 |
| delta_Rv3594 | -0.014 | -0.399 |
| delta_Rv3717 | -0.648 | -0.766 |
| delta_Rv3811 | -0.581 | -0.589 |
| delta_Rv0954 | 0.35 | -0.252 |
| PonA1 | 0.178 | -0.066 |
| EccD1_KO | -0.362 | -0.286 |
| EspI_KO | -0.371 | -0.368 |
| PE35_KO | 0.076 | -1.041 |
| PPE68_KO | 0.432 | -0.483 |
| glycerol2 | 0.015 | -0.911 |
| lignocerate | -0.627 | -0.609 |
| oleate | 0.092 | -0.404 |
| phosphatidylcholine | 0.207 | -0.598 |
| acetate | -0.559 | -1.107 |
| glucAc | -0.881 | -1.029 |
| Rv0950ko | -0.054 | 0.308 |
| Rv1096ko | 0.443 | 0.805 |
| Rv3684ko | -0.308 | 0.259 |
| delta_otsA_trehalose | 0.021 | 0.437 |