Top 10 genes with highest correlation to Rv3638/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1989c/- | (cc=0.5864) | info on Rv1989c/- |
| Rv1374c/- | (cc=0.5662) | info on Rv1374c/- |
| Rv0849/- | (cc=0.55) | info on Rv0849/- |
| Rv1843c/guaB1 | (cc=0.5423) | info on Rv1843c/guaB1 |
| Rv2081c/- | (cc=0.5422) | info on Rv2081c/- |
| Rv1735c/- | (cc=0.5413) | info on Rv1735c/- |
| Rv0233/nrdB | (cc=0.5381) | info on Rv0233/nrdB |
| Rv1734c/- | (cc=0.5265) | info on Rv1734c/- |
| Rv0764c/cyp51 | (cc=0.524) | info on Rv0764c/cyp51 |
| Rv0846c/- | (cc=0.5185) | info on Rv0846c/- |
Correlation of Rv3638/- with Rv0846c/-
Normalized LFCs for Rv3638/-:
(description and provenance of datasets)
| Rv3638/- | Rv0846c/- | |
| Fe_supp_jason_reseq | 0.081 | -0.444 |
| low_pH_jason_reseq | -0.144 | -0.547 |
| NO_jason_reseq | -0.139 | -0.404 |
| B6_jason_reseq | 0.405 | 1.345 |
| MHCII_jason_reseq | 0.936 | 1.352 |
| Isoniazid02 | -0.124 | 0.8 |
| Rifampicin4 | -0.585 | -0.095 |
| Ethambutol3 | -0.28 | 0.551 |
| Meropenem3 | -0.087 | 0.041 |
| Vancomycin16 | -0.096 | 0.09 |
| Rv2680_day32 | 1.23 | 0.29 |
| H37Rv_KO_MarP | 0.8 | 0.809 |
| hypoxia_3wks | -0.04 | 0.813 |
| hypoxia_6wks | 0.297 | 1.76 |
| glycerol | -3.169 | -0.856 |
| cholesterol | -1.042 | -0.157 |
| AJ | 0.037 | 0.598 |
| Bibs02 | 0.115 | 0.695 |
| Bibs02c | 0.045 | 0.279 |
| BL6 | -1.463 | -0.501 |
| BL6a | -0.251 | -0.34 |
| BXD01 | -0.507 | -0.665 |
| BXD010 | -1.283 | -0.208 |
| BXD011 | -0.76 | 0.01 |
| BXD03 | -0.637 | 0.022 |
| BXD04 | 0.181 | -1.062 |
| BXD05 | -0.669 | 0.216 |
| BXD06 | -0.399 | -0.581 |
| BXD07 | -0.507 | -0.724 |
| BXD08 | -0.72 | -0.318 |
| BXD09 | -0.514 | -0.484 |
| CAST | -0.377 | 0.053 |
| CCcont | -1.698 | -1.231 |
| DS01 | 0.243 | 0.778 |
| DS02 | 0.339 | 0.493 |
| DS04 | 0.55 | 0.427 |
| DS0c | 0.192 | 0.035 |
| GP01 | 0.797 | -0.031 |
| GP02 | -0.644 | -0.715 |
| GP0c | 0.062 | -1.433 |
| NOD | 0.153 | 0.495 |
| NZO | 0.374 | 0.452 |
| PWK | -0.121 | -0.283 |
| H37Rv_KO_CtpC | -0.632 | -1.151 |
| H37Rv_KO_CtpD | 0.04 | 0.246 |
| H37Rv_KO_Rv1272 | -0.187 | 0.011 |
| H37Rv_KO_SugABC | 0.418 | -0.288 |
| H37Rv_KO_MbtN | 0.044 | -0.609 |
| Trans05 | -0.335 | -0.153 |
| macrophage_unactivated | -1.297 | -1.152 |
| IL1 | -1.219 | -0.854 |
| Rapamycin | -1.016 | -1.059 |
| Tcell | -1.131 | -0.587 |
| GMCSF | -1.127 | -0.428 |
| IFNab | -1.001 | -0.871 |
| IFNg | -0.804 | -1.248 |
| IFNg_GMCSF1 | -0.446 | -0.619 |
| Rv1432_day32 | -0.789 | 0.799 |
| Rv1565c_day32 | 1.17 | 0.516 |
| secA2_input | -0.778 | 0.058 |
| delta_Rv3594 | -0.014 | 0.392 |
| delta_Rv3717 | -0.648 | -0.361 |
| delta_Rv3811 | -0.581 | -0.427 |
| delta_Rv0954 | 0.35 | 0.857 |
| PonA1 | 0.178 | -0.675 |
| EccD1_KO | -0.362 | -0.329 |
| EspI_KO | -0.371 | 0.2 |
| PE35_KO | 0.076 | 1.365 |
| PPE68_KO | 0.432 | 0.71 |
| glycerol2 | 0.015 | 0.14 |
| lignocerate | -0.627 | 0.15 |
| oleate | 0.092 | 0.597 |
| phosphatidylcholine | 0.207 | 0.479 |
| acetate | -0.559 | -0.178 |
| glucAc | -0.881 | 0.804 |
| Rv0950ko | -0.054 | -0.048 |
| Rv1096ko | 0.443 | -0.63 |
| Rv3684ko | -0.308 | -0.937 |
| delta_otsA_trehalose | 0.021 | 0.803 |