Top 10 genes with highest correlation to Rv3621c/PPE65:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1894c/- | (cc=0.4567) | info on Rv1894c/- |
| Rv3055/- | (cc=0.423) | info on Rv3055/- |
| Rv0577/TB27.3 | (cc=0.4204) | info on Rv0577/TB27.3 |
| Rv2079/- | (cc=0.4061) | info on Rv2079/- |
| Rv2025c/- | (cc=0.4017) | info on Rv2025c/- |
| Rv0962c/lprP | (cc=0.387) | info on Rv0962c/lprP |
| Rv1053c/- | (cc=0.3814) | info on Rv1053c/- |
| Rv1760/- | (cc=0.381) | info on Rv1760/- |
| Rv3595c/PE_PGRS59 | (cc=0.3806) | info on Rv3595c/PE_PGRS59 |
| Rv2755c/hsdS.1 | (cc=0.3681) | info on Rv2755c/hsdS.1 |
Correlation of Rv3621c/PPE65 with Rv3055/-
Normalized LFCs for Rv3621c/PPE65:
(description and provenance of datasets)
| Rv3621c/PPE65 | Rv3055/- | |
| Fe_supp_jason_reseq | 1.108 | -0.038 |
| low_pH_jason_reseq | -0.261 | -1.819 |
| NO_jason_reseq | -0.139 | -1.748 |
| B6_jason_reseq | 0.629 | -0.069 |
| MHCII_jason_reseq | 0.742 | -0.203 |
| Isoniazid02 | -0.019 | 0.0 |
| Rifampicin4 | -0.141 | 0.306 |
| Ethambutol3 | 0.0 | 0.95 |
| Meropenem3 | 1.579 | 1.065 |
| Vancomycin16 | 0.199 | 0.554 |
| Rv2680_day32 | 0.526 | 0.761 |
| H37Rv_KO_MarP | 0.044 | 0.354 |
| hypoxia_3wks | 0.024 | -0.347 |
| hypoxia_6wks | -0.173 | -1.042 |
| glycerol | 0.221 | -0.515 |
| cholesterol | -0.431 | -1.488 |
| AJ | 0.405 | 0.042 |
| Bibs02 | 0.261 | -0.523 |
| Bibs02c | -0.246 | -0.703 |
| BL6 | 0.188 | -0.993 |
| BL6a | -0.172 | -0.894 |
| BXD01 | 0.18 | -0.426 |
| BXD010 | -0.825 | -1.402 |
| BXD011 | 1.466 | -0.563 |
| BXD03 | 0.262 | -0.923 |
| BXD04 | 0.245 | 0.632 |
| BXD05 | -0.237 | -0.967 |
| BXD06 | -0.102 | -1.168 |
| BXD07 | 0.263 | -0.913 |
| BXD08 | 0.475 | -1.242 |
| BXD09 | 0.188 | -1.333 |
| CAST | 0.252 | 0.123 |
| CCcont | 0.301 | -0.225 |
| DS01 | -0.145 | -0.958 |
| DS02 | -0.233 | -1.966 |
| DS04 | 0.628 | 0.298 |
| DS0c | -0.189 | 0.013 |
| GP01 | -0.032 | 0.765 |
| GP02 | 1.109 | 2.108 |
| GP0c | 0.366 | 1.447 |
| NOD | 0.918 | -0.718 |
| NZO | 0.965 | -0.571 |
| PWK | 0.601 | -0.692 |
| H37Rv_KO_CtpC | 0.289 | -1.75 |
| H37Rv_KO_CtpD | -0.041 | -0.895 |
| H37Rv_KO_Rv1272 | 0.403 | -1.317 |
| H37Rv_KO_SugABC | 0.426 | -0.799 |
| H37Rv_KO_MbtN | 0.723 | -0.993 |
| Trans05 | 1.268 | -1.181 |
| macrophage_unactivated | 0.312 | 0.593 |
| IL1 | -0.697 | -0.528 |
| Rapamycin | 0.018 | 0.052 |
| Tcell | 0.062 | -0.58 |
| GMCSF | 0.306 | 0.613 |
| IFNab | 0.227 | -1.088 |
| IFNg | -0.158 | -2.248 |
| IFNg_GMCSF1 | 0.808 | 0.817 |
| Rv1432_day32 | -0.546 | -1.304 |
| Rv1565c_day32 | 0.483 | 0.147 |
| secA2_input | 0.282 | 1.935 |
| delta_Rv3594 | -0.179 | -1.837 |
| delta_Rv3717 | -0.483 | -1.419 |
| delta_Rv3811 | -0.103 | -1.404 |
| delta_Rv0954 | -0.224 | -1.24 |
| PonA1 | 0.328 | -0.39 |
| EccD1_KO | 0.875 | 2.911 |
| EspI_KO | 0.086 | 1.517 |
| PE35_KO | 0.557 | 2.214 |
| PPE68_KO | 0.467 | 3.443 |
| glycerol2 | 0.667 | 1.407 |
| lignocerate | 0.665 | 0.838 |
| oleate | 0.469 | 0.502 |
| phosphatidylcholine | 0.577 | 1.241 |
| acetate | 0.168 | 0.083 |
| glucAc | 0.121 | 0.164 |
| Rv0950ko | 0.956 | -0.727 |
| Rv1096ko | 0.642 | 1.716 |
| Rv3684ko | 0.717 | 0.252 |
| delta_otsA_trehalose | -0.261 | -0.491 |