Top 10 genes with highest correlation to Rv3621c/PPE65:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1894c/- | (cc=0.4567) | info on Rv1894c/- |
| Rv3055/- | (cc=0.423) | info on Rv3055/- |
| Rv0577/TB27.3 | (cc=0.4204) | info on Rv0577/TB27.3 |
| Rv2079/- | (cc=0.4061) | info on Rv2079/- |
| Rv2025c/- | (cc=0.4017) | info on Rv2025c/- |
| Rv0962c/lprP | (cc=0.387) | info on Rv0962c/lprP |
| Rv1053c/- | (cc=0.3814) | info on Rv1053c/- |
| Rv1760/- | (cc=0.381) | info on Rv1760/- |
| Rv3595c/PE_PGRS59 | (cc=0.3806) | info on Rv3595c/PE_PGRS59 |
| Rv2755c/hsdS.1 | (cc=0.3681) | info on Rv2755c/hsdS.1 |
Correlation of Rv3621c/PPE65 with Rv2025c/-
Normalized LFCs for Rv3621c/PPE65:
(description and provenance of datasets)
| Rv3621c/PPE65 | Rv2025c/- | |
| Fe_supp_jason_reseq | 1.108 | 0.385 |
| low_pH_jason_reseq | -0.261 | -0.905 |
| NO_jason_reseq | -0.139 | -0.541 |
| B6_jason_reseq | 0.629 | 0.798 |
| MHCII_jason_reseq | 0.742 | 0.771 |
| Isoniazid02 | -0.019 | 0.111 |
| Rifampicin4 | -0.141 | 0.187 |
| Ethambutol3 | 0.0 | 0.124 |
| Meropenem3 | 1.579 | 1.12 |
| Vancomycin16 | 0.199 | -0.133 |
| Rv2680_day32 | 0.526 | -0.651 |
| H37Rv_KO_MarP | 0.044 | -0.782 |
| hypoxia_3wks | 0.024 | -0.395 |
| hypoxia_6wks | -0.173 | -0.668 |
| glycerol | 0.221 | -2.171 |
| cholesterol | -0.431 | -1.698 |
| AJ | 0.405 | 0.583 |
| Bibs02 | 0.261 | -0.309 |
| Bibs02c | -0.246 | 0.286 |
| BL6 | 0.188 | -0.798 |
| BL6a | -0.172 | -0.301 |
| BXD01 | 0.18 | -0.641 |
| BXD010 | -0.825 | -0.67 |
| BXD011 | 1.466 | -0.824 |
| BXD03 | 0.262 | -0.51 |
| BXD04 | 0.245 | -0.409 |
| BXD05 | -0.237 | -0.882 |
| BXD06 | -0.102 | -1.093 |
| BXD07 | 0.263 | -1.332 |
| BXD08 | 0.475 | -0.726 |
| BXD09 | 0.188 | -0.78 |
| CAST | 0.252 | 0.022 |
| CCcont | 0.301 | -0.658 |
| DS01 | -0.145 | 0.645 |
| DS02 | -0.233 | 0.555 |
| DS04 | 0.628 | -0.52 |
| DS0c | -0.189 | -0.295 |
| GP01 | -0.032 | 1.838 |
| GP02 | 1.109 | 1.966 |
| GP0c | 0.366 | 0.729 |
| NOD | 0.918 | 0.605 |
| NZO | 0.965 | 0.652 |
| PWK | 0.601 | 0.706 |
| H37Rv_KO_CtpC | 0.289 | -0.887 |
| H37Rv_KO_CtpD | -0.041 | 0.082 |
| H37Rv_KO_Rv1272 | 0.403 | -0.888 |
| H37Rv_KO_SugABC | 0.426 | -1.35 |
| H37Rv_KO_MbtN | 0.723 | 0.691 |
| Trans05 | 1.268 | -0.057 |
| macrophage_unactivated | 0.312 | -0.584 |
| IL1 | -0.697 | -1.299 |
| Rapamycin | 0.018 | -0.703 |
| Tcell | 0.062 | -0.893 |
| GMCSF | 0.306 | -0.378 |
| IFNab | 0.227 | -0.26 |
| IFNg | -0.158 | -0.404 |
| IFNg_GMCSF1 | 0.808 | -0.17 |
| Rv1432_day32 | -0.546 | -0.299 |
| Rv1565c_day32 | 0.483 | -0.316 |
| secA2_input | 0.282 | -0.664 |
| delta_Rv3594 | -0.179 | -0.71 |
| delta_Rv3717 | -0.483 | -0.54 |
| delta_Rv3811 | -0.103 | -0.15 |
| delta_Rv0954 | -0.224 | -0.733 |
| PonA1 | 0.328 | -0.881 |
| EccD1_KO | 0.875 | -0.993 |
| EspI_KO | 0.086 | -0.285 |
| PE35_KO | 0.557 | 0.137 |
| PPE68_KO | 0.467 | 0.128 |
| glycerol2 | 0.667 | 0.772 |
| lignocerate | 0.665 | 0.276 |
| oleate | 0.469 | 0.696 |
| phosphatidylcholine | 0.577 | 0.427 |
| acetate | 0.168 | -0.482 |
| glucAc | 0.121 | -0.447 |
| Rv0950ko | 0.956 | 0.41 |
| Rv1096ko | 0.642 | -0.175 |
| Rv3684ko | 0.717 | 1.081 |
| delta_otsA_trehalose | -0.261 | -0.25 |