Top 10 genes with highest correlation to Rv3605c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0136/cyp138 | (cc=0.6273) | info on Rv0136/cyp138 |
| Rv0870c/- | (cc=0.5959) | info on Rv0870c/- |
| Rv0080/- | (cc=0.5763) | info on Rv0080/- |
| Rv0316/- | (cc=0.5732) | info on Rv0316/- |
| Rv2638/- | (cc=0.5636) | info on Rv2638/- |
| Rv0570/nrdZ | (cc=0.5572) | info on Rv0570/nrdZ |
| Rv3445c/esxU | (cc=0.5565) | info on Rv3445c/esxU |
| Rv0964c/- | (cc=0.5554) | info on Rv0964c/- |
| Rv3081/- | (cc=0.5519) | info on Rv3081/- |
| Rv1737c/narK2 | (cc=0.54) | info on Rv1737c/narK2 |
Correlation of Rv3605c/- with Rv3445c/esxU
Normalized LFCs for Rv3605c/-:
(description and provenance of datasets)
| Rv3605c/- | Rv3445c/esxU | |
| Fe_supp_jason_reseq | -0.088 | -0.854 |
| low_pH_jason_reseq | -0.654 | -0.778 |
| NO_jason_reseq | 0.016 | 0.011 |
| B6_jason_reseq | 0.711 | 1.196 |
| MHCII_jason_reseq | 0.726 | 1.337 |
| Isoniazid02 | -0.122 | 0.106 |
| Rifampicin4 | 0.498 | -0.208 |
| Ethambutol3 | 0.173 | 0.054 |
| Meropenem3 | -0.329 | 1.584 |
| Vancomycin16 | 0.777 | -0.061 |
| Rv2680_day32 | -0.008 | -0.72 |
| H37Rv_KO_MarP | 0.096 | -0.801 |
| hypoxia_3wks | -0.618 | -0.379 |
| hypoxia_6wks | -0.15 | -0.205 |
| glycerol | -0.25 | -1.697 |
| cholesterol | -1.077 | -0.468 |
| AJ | -0.281 | -0.069 |
| Bibs02 | 0.212 | 0.633 |
| Bibs02c | -0.291 | 0.33 |
| BL6 | -0.535 | -1.139 |
| BL6a | -1.472 | -0.598 |
| BXD01 | -1.207 | -0.715 |
| BXD010 | -0.783 | -1.243 |
| BXD011 | -1.413 | -0.593 |
| BXD03 | -0.391 | -0.593 |
| BXD04 | -0.738 | -0.114 |
| BXD05 | -1.6 | -1.909 |
| BXD06 | -0.395 | -1.022 |
| BXD07 | -0.873 | -1.357 |
| BXD08 | -0.574 | -0.366 |
| BXD09 | -0.432 | -1.355 |
| CAST | -0.107 | -0.158 |
| CCcont | -0.83 | -1.298 |
| DS01 | -0.149 | 0.956 |
| DS02 | -0.829 | 1.1 |
| DS04 | 0.537 | 0.305 |
| DS0c | 0.024 | 0.544 |
| GP01 | 0.044 | 0.275 |
| GP02 | 1.157 | 0.421 |
| GP0c | -0.5 | 0.528 |
| NOD | -0.168 | -0.83 |
| NZO | -0.184 | -0.335 |
| PWK | 0.401 | -0.033 |
| H37Rv_KO_CtpC | -0.464 | -0.86 |
| H37Rv_KO_CtpD | 0.558 | -3.872 |
| H37Rv_KO_Rv1272 | -2.501 | -3.257 |
| H37Rv_KO_SugABC | -2.054 | -1.838 |
| H37Rv_KO_MbtN | 0.099 | -0.933 |
| Trans05 | -1.565 | -1.718 |
| macrophage_unactivated | -0.275 | 0.379 |
| IL1 | -0.801 | -0.214 |
| Rapamycin | -0.384 | -0.301 |
| Tcell | -0.31 | 0.254 |
| GMCSF | -1.04 | 0.528 |
| IFNab | 0.085 | -0.2 |
| IFNg | -1.128 | -1.053 |
| IFNg_GMCSF1 | 0.54 | 1.109 |
| Rv1432_day32 | 0.974 | 0.567 |
| Rv1565c_day32 | 1.085 | 0.232 |
| secA2_input | 1.572 | 2.519 |
| delta_Rv3594 | -0.74 | 0.0 |
| delta_Rv3717 | -1.252 | -0.189 |
| delta_Rv3811 | -0.962 | -0.335 |
| delta_Rv0954 | -0.636 | 0.758 |
| PonA1 | 0.564 | 0.427 |
| EccD1_KO | 0.151 | 0.47 |
| EspI_KO | 0.565 | 0.747 |
| PE35_KO | -0.023 | 1.158 |
| PPE68_KO | 0.928 | -0.022 |
| glycerol2 | 0.93 | 0.867 |
| lignocerate | 0.066 | 0.96 |
| oleate | 0.584 | 0.988 |
| phosphatidylcholine | 0.959 | 0.81 |
| acetate | 2.482 | 1.335 |
| glucAc | 1.134 | 0.023 |
| Rv0950ko | 0.455 | 1.375 |
| Rv1096ko | 0.869 | 2.576 |
| Rv3684ko | 0.354 | 1.772 |
| delta_otsA_trehalose | 0.372 | -1.792 |