Top 10 genes with highest correlation to Rv3605c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0136/cyp138 | (cc=0.6273) | info on Rv0136/cyp138 |
| Rv0870c/- | (cc=0.5959) | info on Rv0870c/- |
| Rv0080/- | (cc=0.5763) | info on Rv0080/- |
| Rv0316/- | (cc=0.5732) | info on Rv0316/- |
| Rv2638/- | (cc=0.5636) | info on Rv2638/- |
| Rv0570/nrdZ | (cc=0.5572) | info on Rv0570/nrdZ |
| Rv3445c/esxU | (cc=0.5565) | info on Rv3445c/esxU |
| Rv0964c/- | (cc=0.5554) | info on Rv0964c/- |
| Rv3081/- | (cc=0.5519) | info on Rv3081/- |
| Rv1737c/narK2 | (cc=0.54) | info on Rv1737c/narK2 |
Correlation of Rv3605c/- with Rv0870c/-
Normalized LFCs for Rv3605c/-:
(description and provenance of datasets)
| Rv3605c/- | Rv0870c/- | |
| Fe_supp_jason_reseq | -0.088 | -0.062 |
| low_pH_jason_reseq | -0.654 | -0.308 |
| NO_jason_reseq | 0.016 | 1.013 |
| B6_jason_reseq | 0.711 | -0.715 |
| MHCII_jason_reseq | 0.726 | 0.731 |
| Isoniazid02 | -0.122 | -0.664 |
| Rifampicin4 | 0.498 | -0.485 |
| Ethambutol3 | 0.173 | -0.136 |
| Meropenem3 | -0.329 | 0.908 |
| Vancomycin16 | 0.777 | 0.088 |
| Rv2680_day32 | -0.008 | -0.139 |
| H37Rv_KO_MarP | 0.096 | 0.68 |
| hypoxia_3wks | -0.618 | -0.642 |
| hypoxia_6wks | -0.15 | -0.576 |
| glycerol | -0.25 | -0.799 |
| cholesterol | -1.077 | -0.376 |
| AJ | -0.281 | -0.373 |
| Bibs02 | 0.212 | 0.491 |
| Bibs02c | -0.291 | 0.109 |
| BL6 | -0.535 | -0.324 |
| BL6a | -1.472 | -0.696 |
| BXD01 | -1.207 | -0.852 |
| BXD010 | -0.783 | -0.156 |
| BXD011 | -1.413 | -0.188 |
| BXD03 | -0.391 | -1.092 |
| BXD04 | -0.738 | -0.503 |
| BXD05 | -1.6 | -0.666 |
| BXD06 | -0.395 | -0.854 |
| BXD07 | -0.873 | -0.255 |
| BXD08 | -0.574 | -0.708 |
| BXD09 | -0.432 | -0.85 |
| CAST | -0.107 | -0.654 |
| CCcont | -0.83 | 0.553 |
| DS01 | -0.149 | 0.036 |
| DS02 | -0.829 | 0.025 |
| DS04 | 0.537 | 0.044 |
| DS0c | 0.024 | 0.409 |
| GP01 | 0.044 | 0.381 |
| GP02 | 1.157 | 0.828 |
| GP0c | -0.5 | -0.726 |
| NOD | -0.168 | -0.187 |
| NZO | -0.184 | 0.023 |
| PWK | 0.401 | -0.509 |
| H37Rv_KO_CtpC | -0.464 | -0.845 |
| H37Rv_KO_CtpD | 0.558 | 0.934 |
| H37Rv_KO_Rv1272 | -2.501 | -2.361 |
| H37Rv_KO_SugABC | -2.054 | -1.757 |
| H37Rv_KO_MbtN | 0.099 | -1.421 |
| Trans05 | -1.565 | -0.187 |
| macrophage_unactivated | -0.275 | -1.884 |
| IL1 | -0.801 | 0.252 |
| Rapamycin | -0.384 | -0.181 |
| Tcell | -0.31 | -0.606 |
| GMCSF | -1.04 | -0.269 |
| IFNab | 0.085 | -0.308 |
| IFNg | -1.128 | -0.208 |
| IFNg_GMCSF1 | 0.54 | -0.503 |
| Rv1432_day32 | 0.974 | 1.802 |
| Rv1565c_day32 | 1.085 | 0.697 |
| secA2_input | 1.572 | -0.183 |
| delta_Rv3594 | -0.74 | -0.375 |
| delta_Rv3717 | -1.252 | -0.852 |
| delta_Rv3811 | -0.962 | -1.689 |
| delta_Rv0954 | -0.636 | -0.673 |
| PonA1 | 0.564 | 0.143 |
| EccD1_KO | 0.151 | 1.095 |
| EspI_KO | 0.565 | 0.744 |
| PE35_KO | -0.023 | -0.405 |
| PPE68_KO | 0.928 | -0.893 |
| glycerol2 | 0.93 | 1.562 |
| lignocerate | 0.066 | 2.115 |
| oleate | 0.584 | -0.425 |
| phosphatidylcholine | 0.959 | 1.562 |
| acetate | 2.482 | 1.637 |
| glucAc | 1.134 | 1.823 |
| Rv0950ko | 0.455 | 0.781 |
| Rv1096ko | 0.869 | 0.241 |
| Rv3684ko | 0.354 | 0.848 |
| delta_otsA_trehalose | 0.372 | 0.897 |