Top 10 genes with highest correlation to Rv3605c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0136/cyp138 | (cc=0.6273) | info on Rv0136/cyp138 |
| Rv0870c/- | (cc=0.5959) | info on Rv0870c/- |
| Rv0080/- | (cc=0.5763) | info on Rv0080/- |
| Rv0316/- | (cc=0.5732) | info on Rv0316/- |
| Rv2638/- | (cc=0.5636) | info on Rv2638/- |
| Rv0570/nrdZ | (cc=0.5572) | info on Rv0570/nrdZ |
| Rv3445c/esxU | (cc=0.5565) | info on Rv3445c/esxU |
| Rv0964c/- | (cc=0.5554) | info on Rv0964c/- |
| Rv3081/- | (cc=0.5519) | info on Rv3081/- |
| Rv1737c/narK2 | (cc=0.54) | info on Rv1737c/narK2 |
Correlation of Rv3605c/- with Rv0964c/-
Normalized LFCs for Rv3605c/-:
(description and provenance of datasets)
| Rv3605c/- | Rv0964c/- | |
| Fe_supp_jason_reseq | -0.088 | -2.796 |
| low_pH_jason_reseq | -0.654 | 0.524 |
| NO_jason_reseq | 0.016 | -0.953 |
| B6_jason_reseq | 0.711 | 0.912 |
| MHCII_jason_reseq | 0.726 | 0.963 |
| Isoniazid02 | -0.122 | 0.242 |
| Rifampicin4 | 0.498 | 0.663 |
| Ethambutol3 | 0.173 | -0.303 |
| Meropenem3 | -0.329 | -0.277 |
| Vancomycin16 | 0.777 | 0.366 |
| Rv2680_day32 | -0.008 | -0.423 |
| H37Rv_KO_MarP | 0.096 | -0.085 |
| hypoxia_3wks | -0.618 | 0.0 |
| hypoxia_6wks | -0.15 | 0.699 |
| glycerol | -0.25 | -0.149 |
| cholesterol | -1.077 | -0.378 |
| AJ | -0.281 | -0.619 |
| Bibs02 | 0.212 | 0.461 |
| Bibs02c | -0.291 | 0.249 |
| BL6 | -0.535 | -0.242 |
| BL6a | -1.472 | -0.815 |
| BXD01 | -1.207 | -1.849 |
| BXD010 | -0.783 | -2.665 |
| BXD011 | -1.413 | -1.69 |
| BXD03 | -0.391 | 0.14 |
| BXD04 | -0.738 | -1.484 |
| BXD05 | -1.6 | -2.345 |
| BXD06 | -0.395 | -1.655 |
| BXD07 | -0.873 | -1.183 |
| BXD08 | -0.574 | -1.414 |
| BXD09 | -0.432 | -1.783 |
| CAST | -0.107 | 1.098 |
| CCcont | -0.83 | -0.802 |
| DS01 | -0.149 | 0.739 |
| DS02 | -0.829 | 0.707 |
| DS04 | 0.537 | 0.802 |
| DS0c | 0.024 | 0.33 |
| GP01 | 0.044 | -0.176 |
| GP02 | 1.157 | -0.148 |
| GP0c | -0.5 | 0.267 |
| NOD | -0.168 | 0.399 |
| NZO | -0.184 | -0.63 |
| PWK | 0.401 | 0.081 |
| H37Rv_KO_CtpC | -0.464 | -2.904 |
| H37Rv_KO_CtpD | 0.558 | 0.829 |
| H37Rv_KO_Rv1272 | -2.501 | -1.711 |
| H37Rv_KO_SugABC | -2.054 | -0.634 |
| H37Rv_KO_MbtN | 0.099 | -1.751 |
| Trans05 | -1.565 | -1.834 |
| macrophage_unactivated | -0.275 | -0.275 |
| IL1 | -0.801 | 0.092 |
| Rapamycin | -0.384 | 0.095 |
| Tcell | -0.31 | 0.365 |
| GMCSF | -1.04 | 0.689 |
| IFNab | 0.085 | -1.046 |
| IFNg | -1.128 | -0.452 |
| IFNg_GMCSF1 | 0.54 | -0.035 |
| Rv1432_day32 | 0.974 | 1.55 |
| Rv1565c_day32 | 1.085 | -2.41 |
| secA2_input | 1.572 | 0.388 |
| delta_Rv3594 | -0.74 | -0.203 |
| delta_Rv3717 | -1.252 | -0.321 |
| delta_Rv3811 | -0.962 | -1.02 |
| delta_Rv0954 | -0.636 | -1.344 |
| PonA1 | 0.564 | -0.756 |
| EccD1_KO | 0.151 | 0.52 |
| EspI_KO | 0.565 | -0.508 |
| PE35_KO | -0.023 | 1.088 |
| PPE68_KO | 0.928 | 1.657 |
| glycerol2 | 0.93 | 2.826 |
| lignocerate | 0.066 | 3.942 |
| oleate | 0.584 | 1.969 |
| phosphatidylcholine | 0.959 | 3.419 |
| acetate | 2.482 | 4.683 |
| glucAc | 1.134 | 3.524 |
| Rv0950ko | 0.455 | -0.178 |
| Rv1096ko | 0.869 | -0.458 |
| Rv3684ko | 0.354 | -0.786 |
| delta_otsA_trehalose | 0.372 | -0.415 |