Top 10 genes with highest correlation to Rv3605c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0136/cyp138 | (cc=0.6273) | info on Rv0136/cyp138 |
| Rv0870c/- | (cc=0.5959) | info on Rv0870c/- |
| Rv0080/- | (cc=0.5763) | info on Rv0080/- |
| Rv0316/- | (cc=0.5732) | info on Rv0316/- |
| Rv2638/- | (cc=0.5636) | info on Rv2638/- |
| Rv0570/nrdZ | (cc=0.5572) | info on Rv0570/nrdZ |
| Rv3445c/esxU | (cc=0.5565) | info on Rv3445c/esxU |
| Rv0964c/- | (cc=0.5554) | info on Rv0964c/- |
| Rv3081/- | (cc=0.5519) | info on Rv3081/- |
| Rv1737c/narK2 | (cc=0.54) | info on Rv1737c/narK2 |
Correlation of Rv3605c/- with Rv2638/-
Normalized LFCs for Rv3605c/-:
(description and provenance of datasets)
| Rv3605c/- | Rv2638/- | |
| Fe_supp_jason_reseq | -0.088 | -0.785 |
| low_pH_jason_reseq | -0.654 | 0.512 |
| NO_jason_reseq | 0.016 | 0.719 |
| B6_jason_reseq | 0.711 | 0.607 |
| MHCII_jason_reseq | 0.726 | 1.199 |
| Isoniazid02 | -0.122 | -0.137 |
| Rifampicin4 | 0.498 | 0.279 |
| Ethambutol3 | 0.173 | -0.146 |
| Meropenem3 | -0.329 | -0.06 |
| Vancomycin16 | 0.777 | 0.042 |
| Rv2680_day32 | -0.008 | 0.944 |
| H37Rv_KO_MarP | 0.096 | -0.045 |
| hypoxia_3wks | -0.618 | -0.55 |
| hypoxia_6wks | -0.15 | 1.28 |
| glycerol | -0.25 | -0.102 |
| cholesterol | -1.077 | 0.163 |
| AJ | -0.281 | 0.091 |
| Bibs02 | 0.212 | -0.056 |
| Bibs02c | -0.291 | 0.061 |
| BL6 | -0.535 | 0.021 |
| BL6a | -1.472 | -0.913 |
| BXD01 | -1.207 | -1.3 |
| BXD010 | -0.783 | -0.34 |
| BXD011 | -1.413 | -2.215 |
| BXD03 | -0.391 | -1.293 |
| BXD04 | -0.738 | 0.099 |
| BXD05 | -1.6 | -0.989 |
| BXD06 | -0.395 | -1.212 |
| BXD07 | -0.873 | -1.905 |
| BXD08 | -0.574 | -1.813 |
| BXD09 | -0.432 | -0.932 |
| CAST | -0.107 | -0.701 |
| CCcont | -0.83 | -0.883 |
| DS01 | -0.149 | 0.272 |
| DS02 | -0.829 | -0.925 |
| DS04 | 0.537 | 0.824 |
| DS0c | 0.024 | 0.118 |
| GP01 | 0.044 | -0.313 |
| GP02 | 1.157 | 0.429 |
| GP0c | -0.5 | 1.536 |
| NOD | -0.168 | -0.122 |
| NZO | -0.184 | 0.842 |
| PWK | 0.401 | -0.597 |
| H37Rv_KO_CtpC | -0.464 | -0.357 |
| H37Rv_KO_CtpD | 0.558 | -0.33 |
| H37Rv_KO_Rv1272 | -2.501 | -1.469 |
| H37Rv_KO_SugABC | -2.054 | -1.338 |
| H37Rv_KO_MbtN | 0.099 | -0.865 |
| Trans05 | -1.565 | -1.674 |
| macrophage_unactivated | -0.275 | -0.568 |
| IL1 | -0.801 | -1.201 |
| Rapamycin | -0.384 | -1.182 |
| Tcell | -0.31 | -0.968 |
| GMCSF | -1.04 | -1.096 |
| IFNab | 0.085 | -0.928 |
| IFNg | -1.128 | -0.871 |
| IFNg_GMCSF1 | 0.54 | -1.436 |
| Rv1432_day32 | 0.974 | 0.495 |
| Rv1565c_day32 | 1.085 | -0.648 |
| secA2_input | 1.572 | -0.291 |
| delta_Rv3594 | -0.74 | -1.309 |
| delta_Rv3717 | -1.252 | 0.204 |
| delta_Rv3811 | -0.962 | -0.373 |
| delta_Rv0954 | -0.636 | 0.349 |
| PonA1 | 0.564 | -0.193 |
| EccD1_KO | 0.151 | 0.181 |
| EspI_KO | 0.565 | -0.853 |
| PE35_KO | -0.023 | -0.49 |
| PPE68_KO | 0.928 | -0.403 |
| glycerol2 | 0.93 | 2.169 |
| lignocerate | 0.066 | 2.979 |
| oleate | 0.584 | -0.658 |
| phosphatidylcholine | 0.959 | 2.657 |
| acetate | 2.482 | 2.675 |
| glucAc | 1.134 | 2.4 |
| Rv0950ko | 0.455 | 1.396 |
| Rv1096ko | 0.869 | 0.67 |
| Rv3684ko | 0.354 | 0.508 |
| delta_otsA_trehalose | 0.372 | -0.228 |